Corresponding Author Publications

- First Author(s)

- Corresponding Author(s)

Preprint

• Multimodal Electronic Health Record Foundation Models with Electrocardiogram for Cardiovascular Disease Prediction (Link)
  2025.11.10.v1 medRxiv - Junmo Kim, Kwangsoo Kim 

• MedRep: Medical Concept Representation for General Electronic Health Record Foundation Models (Link)
  2025.08.14.v3 arXiv - Junmo Kim, Kwangsoo Kim 

• Contrastive Learning for Omics-guided Whole-slide Visual Embedding Representation (Link)
  2025.01.12.v1 BioRxiv - Suwan Yu, Yooeun Kim, Sangseon Lee, Kwangsoo Kim 

• scMILD: Single-cell Multiple Instance Learning for Sample Classification and Associated Subpopulation Discovery (Link)
  2025.01.11.v1 BioRxiv - Kyeonghun Jeong, Jinwook Choi, Kwangsoo Kim 

2025

• Multi-omic relay velocity modeling uncovers dynamic chromatin-transcription regulation across cell states ()

accepted 2025.11.26. Nature Communications - Ari Hong, Sangseon Lee, Kwangsoo Kim

• Two stage large language model approach enhancing entity classification and relationship mapping in radiology reports (Link)

2025.08.27. Scientific Reports - Chaiho Shin, Dareen Eom, Kwangsoo Kim, Kye Hwa Lee

• LUNAR: Periodicity-aware time-series analysis framework for LUNg Auscultation Respiratory detection (Link)

2025.08.27. Computers in Biology and Medicine - Jisoo Lee, Sa-Yoon Park, Ji Soo Park, Kwangsoo Kim

• Detection of Breath Cycles in Pediatric Lung Sounds via an Object Detection-Based Transfer Learning Method (Link)
  2025.07.01. Biomedical Signal Processing and Control - Sa-Yoon Park, Ji Soo Park, Dong In Suh, Kwangsoo Kim

• Pretrained Patient Trajectories for Adverse Drug Event Prediction Using Common Data Model-based Electronic Health Records (Link)
  2025.06.13. Communications Medicine - Junmo Kim, Rae Woong Park, Kwangsoo Kim 

• A deep-learning algorithm using real-time collected intraoperative vital sign signals for predicting acute kidney injury after major non-cardiac surgeries: A modelling study (Link)
  2025.04.29. PLOS Medicine - Sehoon Park, Soomin Jung, Kwangsoo Kim, Hajoeng Lee

• EpicPred: attention-based multiple instance learning for predicting phenotypes driven by epitope binding TCRs (Link)
  2025.02.21. Bioinformatics - Jaemin Jeon, Inuk Jung, Kwangsoo Kim

• Sex-specific Cardiovascular Risks and Mortality in Patients with Panhypopituitarism: A Nationwide Cohort Study (Link)
  2025.02.11. Endocrinology and Metabolism - Seung Shin Park, Hyunmook Jeong, Kwangsoo Kim, Jung Hee Kim

• Prediction of Reduced Left Ventricular Ejection Fraction Using Atrial Fibrillation or Flutter Electrocardiograms: A Machine-Learning Study (Link)
  2025.01.17. Digital Health - Soonil Kwon, SooMin Chung, So-Ryoung Lee, Kwangsoo Kim

• Development of Predictive Model of Surgical Case Durations Using Machine Learning Approach (Link)
  2025.01.14. Journal of Medical Systems - Jung-Bin Park, Gyun-Ho Roh, Kwangsoo Kim, Hee-Soo Kim

• A common data model for oral anticoagulants-related risk of spontaneous intracranial hemorrhage (Link)
  2025.01.08. Journal of Clinical Neuroscience - Noah Hong, Yeh-Hee Ko, Kwangsoo Kim, Won-Sang Cho

2024

• Identifying potential medical aid beneficiaries using machine learning: A Korean Nationwide cohort study (Link)
  2024.12.25. International Journal of Medical Informatics - Junmo Kim, Yong Jin Kwon, Kwangsoo Kim 

• Spatially Resolved Whole-Transcriptomic and Proteomic Profiling of Lung Cancer and Its Immune Microenvironment According to PD-L1 Expression (Link)
  2024.10.30. Cancer Immunology Research - Jaemoon Koh, Dongjoo Lee, Kwangsoo Kim, Yoon Kyung Jeon, Doo Hyun Chung 

• Integrated analysis of circRNA regulation with ADARB2 enrichment in inhibitory neurons (Link)
  2024.09.28. Computers in Biology and Medicine - Suwan Yu, Hongseok Ha, Kwangsoo Kim 

• Deep learning-based histological predictions of chromosomal instability in colorectal cancer (Link)
  2024.09.15. American Journal of Cancer Research - Dongwoo Hyeon, Younghoon Kim, Kwangsoo Kim

• Deep learning-based prediction of Clostridioides difficile infection caused by antibiotics using longitudinal electronic health records (Link)
  2024.08.24. NPJ Digital Medicine - Junmo Kim, Joo Seong Kim, Jun Kyu Lee, Kwangsoo Kim 

• Denoiseit: denoising gene expression data using rank based isolation trees (Link)
  2024.08.21. BMC bioinformatics - Jaemin Jeon, Kwangsoo Kim, Inuk Jung 

• Discovery of high-expressing lncRNA-derived sORFs as potential tumor-associated antigens in hepatocellular carcinoma (Link)
  2024.08.08. Genes & Genomics - Yooeun Kim, Hongseok Ha, Kwangsoo Kim 

• Financial Benefits of Renal Dose-Adjusted Dipeptidyl Peptidase-4 Inhibitors for Patients with Type 2 Diabetes and Chronic Kidney Disease (Link)
  2024.08.01. Endocrinology and Metabolism - Hun Jee Choe, Yeh-Hee Ko, Sun Joon Moon, Young Min Cho, Kwangsoo Kim 

• Healthcare burden changes by restricted physical activities in lumbar spinal stenosis and spondylolisthesis: a retrospective large cohort study during the COVID-19 pandemic (Link)
  2024.05.24. BMC Musculoskeletal Disorders - Jun-Hoe Kim, Yebin Chegal, Kwangsoo Kim, Chang-Hyun Lee

2023

• Expression Profiles of Hypoxia-Related Genes of Cancers Originating from Anatomically Similar Locations Using TCGA Database Analysis (Link)
  2023.12.31. Medicines - Hye Lim Bae, Kyeonghun Jeong, Kwangsoo Kim, Young Jun Chai

• Subtyping of COVID-19 samples based on cell-cell interaction in single cell transcriptomes (Link)
  2023.11.10. Scientific Reports - Kyeonghun Jeong, Kwangsoo Kim 

• Application of the Khorana score for cancer-associated thrombosis prediction in patients of East Asian ethnicity undergoing ambulatory chemotherapy (Link)
  2023.06.05. Thrombosis Journal - Hyerim Ha, Yeh-Hee Ko, Kwangsoo Kim, Junshik Hong

• Development and validation of common data model-based fracture prediction model using machine learning algorithm (Link)
  2023.05.17. Osteoporosis International - Sung Hye Kong, Jung Hee Kim, Kwangsoo Kim 

2020~2022

• Risks of complicated acute appendicitis in patients with psychiatric disorders (Link)
  2022.12.05. BMC psychiatry - Junmo Kim, Chaeyoung Yang, Kwangsoo Kim, Il Bin Kim 

• Identification of tissue of origin in cancer of unknown primary using a targeted bisulfite sequencing panel (Link)
  2022.04.27. Epigenomics - Jeong Mo Bae, Kwangsoo Kim, Gyeong Hoon Kang 

• Assessment of Inter-Institutional Post-Operative Hypoparathyroidism Status Using a Common Data Model (Link)
  2021.09.28. Journal of Clinical Medicine - Joon-Hyop Lee, Suhyun Kim, Kwangsoo Kim, Young Jun Chai 

• Pan-cancer methylation analysis reveals an inverse correlation of tumor immunogenicity with methylation aberrancy (Link)
  2020.11.24. Cancer Immunology, Immunotherapy - Changhee Park, Kyeonghun Jeong, Kwangsoo Kim, Chan-Young Ock 

• Identification of synthetic chemosensitivity genes paired with BRAF for BRAF/MAPK inhibitors (Link)
  2020.11.17. Scientific Reports - Kye Hwa Lee, Jinmin Goh, Kwangsoo Kim, Kye Hwa Lee

• A national database analysis for factors associated with thyroid cancer occurrence (Link)
  2020.10.20. Scientific Reports - Joon-Hyop Lee, Sora Youn, Kyu Eun Lee, Ka Hee Yi