Education

• (2021.03 ~) Integrated PhD Program, Interdisciplinary Program in Bioengineering, Seoul National University, Seoul, Korea

• (2010.03 ~ 2018.02) B.S. Division of Life science, Korea University, Seoul, Korea

Research Experiences

• (2020.05 ~ 2021.01) Bioinformatics Researcher, Cancer Research Institute, Seoul National University Hospital, Seoul, Korea

• (2017.07 ~ 2019.02) Bioinformatics Researcher, Division of Clinical Bioinformatics, Biomedical Research Institute, Seoul National University Hospital, Seoul, Korea

Publications 

• (First) Kyeonghun Jeong, Jinwook Choi*, Kwangsoo Kim*, "scMILD: Single-cell multiple instance learning for sample classification and associated subpopulation discovery", iScience, 2026; 29. (Link)

• (First) Jae-ik Oh+, Kyeonghun Jeong+; Jung Hun Koh, Jin Kyung Kwon, Semin Cho, Jeong Min Cho, Yaerim Kim, Hajeong Lee, Hyun Je Kim, Jeonghwan Lee,  Jung Pyo Lee, Ji In Park, Jung Tak Park, Kwangsoo Kim*, Sehoon Park*, Dong Ki Kim. "Systemic Proteome Profiling to Differentiate Primary Glomerular Diseases". Journal of the American Society of Nephrology  (2026) (Link)

• (First) Kyeonghun Jeong+, Hongseok Ha+, Jinchuan Xing, Jinwook Choi*, Kwangsoo Kim*, "scTELL: a single-cell ATAC-seq tool for locus-specific transposable element identification in chromatin accessibility." Mobile DNA (2026) (Link).

• (First) Hye Lim Bae+, Kyeonghun Jeong+, Sunah Yang, Hyeji Jun,  Kwangsoo Kim*, Young Jun Chai*, "Expression profiles of hypoxia-related genes of cancers originating from anatomically similar locations using TCGA database analysis". Medicines, 2023/12/31 (Link)

• (First) Kyeonghun Jeong, Yooeun Kim, Jaemin Jeon, Kwangsoo Kim*. "Subtyping of COVID-19 samples based on cell-cell interaction in single cell transcriptomes." Scientific Reports 13.1 (2023): 19629. (Link)

• (First) Jinyoung Kim+, Kyeonghun Jeong+, Hyeji Jun,  Kwangsoo Kim, Hanbaek Yi, Songyi Park, Go-un Woo, Dae-Won Lee, Tae-Young Kim, Kyung-hun Lee*, Seock-Ah Im*, "Mutations of TP53 and genes related to homologous recombination repair in breast cancer with germline BRCA1/2 mutations". Human Genomics, 2023/1/6 (Link)

• Jae Sik Kim+, Sunah Yang+, Kyeonghun Jeong, Dong-Yun Kim, Kwangsoo Kim*, Hyun-Cheol Kang*, "Plasma Cell-Free DNA in Uterine Cervical Cancer: Therapeutic Monitoring and Prognostic Values after Radical Radiotherapy", Cancer Research and Treatment, 2022/11/2 (Link)

• (First) Changhee Park+, Kyeonghun Jeong+, Joon-Hyeong Park, Sohee Jung, Jeong Mo Bae, Kwangsoo Kim*, Chan-Young Ock*, Miso Kim, Bhumsuk Keam, Tae Min Kim, Yoon Kyung Jeon, Se-Hoon Lee, Ju-Seog Lee, Dong-Wan Kim, Gyeong Hoon Kang, Doo Hyun Chung, Dae Seog Heo, "Pan-cancer methylation analysis reveals an inverse correlation of tumor immunogenicity with methylation aberrancy,"  Cancer Immunology, Immunotherapy, 2020/11/24 (Link)

• Ahrum Min+, Kwangsoo Kim+, Kyeonghun Jeong, Seongmin Choi, Seongyeong Kim, Koung Jin Suh, Kyung-Hun Lee*, Sun Kim, Seock-Ah Im*, “Homologous Repair Deficiency score for identifying breast cancers with defective DNA damage response beyond BRCA mutations,” Scientific Reports, 10(1):1-14, 2020/7/27 (Link)

• Saem Hur+, Ju Hee Kim+, Jihui Yun, Young Wook Ju, Jong Min Han, Woohang Heo, Kwangsoo Kim, Kyeonghun Jeong, Han-Byoel Lee, Wonshik Han, Dong-Young Noh, Jong-Il Kim, Hyeong-Gon Moon*, "Protein Phosphatase 1H, Cyclin-Dependent Kinase Inhibitor p27, and Cyclin-Dependent Kinase 2 in Paclitaxel Resistance for Triple Negative Breast Cancers," Journal of Breast Cancer, 23(2):162, 2020/4 (Link)

• Ji Hye Moon+, Kyeonghun Jeong, Kwangsoo Kim, Cheol Lee, Min-Sun Jin*, Han Suk Ryu*, "Comparison of clinical performance of two high-throughput liquid bead microarray assays, GeneFinder and CareGENE, for cervical screening in the general population," Archives of virology, 164(11):2699-2706, 2019 (Link)

• Bok Sil Hong+, Han Suk Ryu, Namshin Kim, Jisun Kim, Eunshin Lee, Hyunhye Moon, Kyoung Hyoun Kim, Min-Sun Jin, Nam Hoon Kwon, Sunghoon Kim, Donghyun Kim, Doo Hyun Chung, Kyeonghun Jeong, Kwangsoo Kim, Ki Yoon Kim, Han-Byoel Lee, Wonshik Han, Jihui Yun, Jong-Il Kim, Dong-Young Noh, Hyeong-Gon Moon*, "Tumor suppressor miRNA-204-5p regulates growth, metastasis, and immune microenvironment remodeling in breast cancer," Cancer research, 79(7):1520-1534, 2019/4/1 (Link)

International Awards and Honors

• (2016) Gold medal, International Genetically Engineered Machine, Geletricell : Agar Utilizing Dualcore EMFC (Student leader, Team: Korea_U_Seoul) (Link, Project Link)

• (2015) Gold medal, International Genetically Engineered Machine, The Gil: The pathfinder for Synthetic Biologists (Software part leader, Team: Korea_U_Seoul) (Link, Project Link)

기타

• (2016) MATLAB 을 이용한 박테리아 성장 모델링 프로그램의 제작 및 바이오 전지에의 응용, 2016 Creative Challenge Program, Korea University

• (2016) 고려대 합성생물학회 동아리 회장 (관련 기사1, 기사2)

• (2016) 대학생 국제컨퍼런스 ICISTS 산하 동아리 ICISTS-HERMES 회장 

• (2015) 물질대사 경로 탐색 프로그램 제작, 2015 Creative Challenge Program, Korea University

• (2015.03 ~ 2016.02) 학부연구원, 합성생물학 및 계산생물학 연구실, 고려대학교 (링크)