Our lab is interested in building technologies to answer fundamental biological questions and solve critical bottlenecks in biological engineering. Currently we are focusing on generation of high-throughput biological systems in mammalian systems, enabling rapid and precise protein characterization while gaining biological insights and developing novel functional tools.
Below are our ongoing projects and their applications.
We are developing a unified platform to analyze diverse proteins using protein tagging technology. Traditional approaches require specific antibodies or analytical tools for each protein, creating a significant bottleneck in protein studies. Our system overcomes these limitations, enabling high-throughput analysis of multiple proteins simultaneously. This efficient platform allows us to rapidly characterize protein properties on a large scale.
Using this technology, we explore human proteins consisting of approximately 30,000 known protein-coding genes along with unexplored territories such as small ORFs and functional RNAs. Our particular focus is on systematically tagging and analyzing difficult-to-tag proteins to identify new components to discover novel cellular components.
Our lab is interested in building a large-scale analytical system that can comparable-quantitatively characterize protein properties. This system combines our current tagging system with a recording system that converts physical protein-DNA interactions into nucleotide sequences, enabling large-scale protein characterization.
By cross-analyzing libraries of transcription factors against libraries of disease-related mutants in TF binding sequences, we systematically compare TF-DNA binding affinities. This work will help us understand the regulatory relationships between disease-associated SNPs and transcription factors, offering insights into how genetic variations can lead to disease development.
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