Submitted
Z. Yu, T. Luong, S. Banuelos, A. Sue, M.A. Horn, H. Ryu, D. Roach, R. Segal, and Q. Huang. Modeling multiphage-bacteria kinetics to predict phage therapy potency and longevity, Submitted to Cells, 2023.
Published
A.J. Frank, K. Larripa, H. Ryu, and S. Roblitz. Macrophage phenotype transitions in a stochastic gene regulatory network model, Journal of Theoretical Biology, 575:111634, 2023.
J. Miller**, H. Ryu**, X. Wang, V. Booth, and S.A. Campbell. Patterns of synchronization in 2D networks of inhibitory neurons, Frontiers in Computational Neuroscience, 16:903883, 2022.
H. Ryu* and B. Zhu. Creating and assessing an academic learning community between biology and statistics courses. PRIMUS, 32(3):416–431, 2022.
H. Ryu*, J. Miller, Z. Teymuroglu, X. Wang, V. Booth, and S.A. Campbell. Spatially localized cluster solutions in inhibitory neural networks. Mathematical Biosciences, 336:108591, 2021.
A.J. Frank, K. Larripa, H. Ryu, R. Snodgrass and S. Roblitz. Bifurcation and sensitivity analysis reveal key drivers of multistability in a model of macrophage polarization. Journal of Theoretical Biology, 509:110511, 2021.
S. Banuelos**, H. Gulbudak**, M.A. Horn**, Q. Huang**, A. Nandi**, H. Ryu**, and R. Segal**. Investigating the impact of combination phage and antibiotic therapy: a modeling study. In R. Segal, B. Shtylla, and S. Sindi (eds.), Using Mathematics to Understand Biological Complexity: From Cells to Populations. vol. 22, pages 111–134, Springer, AWM Series, 2021.
H. Ryu* and S.A. Campbell. Stability, bifurcation and phase-locking of time-delayed excitatory-inhibitory neural networks. Mathematical Biosciences and Engineering, 17(6):7931–7957, 2020.
H. Ryu* and S.A. Campbell. Geometric analysis of synchronization in neuronal networks with global inhibition and coupling delays. Philosophical Transactions of the Royal Society A, 337(2153), 2019.
J. Miller, H. Ryu*, Z. Teymuroglu, X. Wang, V. Booth, and S.A. Campbell. Clustering in inhibitory neural networks with nearest neighbor coupling. In A. Radunskaya and T. Jackson (eds.), Applications of Dynamical Systems in Biology and Medicine, The IMA Volumes in Mathematics and its Applications. vol. 158, pages 99–121, Springer, 2015.
H. Ryu and A.T. Layton. Feedback-mediated dynamics in a model of coupled nephrons with compliant short loop of Henle. AMS Contemporary Mathematics, Biological Fluid Dynamics: Modeling, Computations, and Applications, 628:209–237, 2014.
H. Ryu and A.T. Layton. Tubular fluid flow and distal NaCl delivery mediated by tubuloglomerular feedback in the rat kidney. Journal of Mathematical Biology, 68(4):1023–1049, 2014.
H. Ryu and A.T. Layton. Effect of tubular inhomogeneities on feedback-mediated dynamics of a model of a thick ascending limb. Mathematical Medicine and Biology, 30(3):191–212, 2013.
A.T. Layton, P. Pham, and H. Ryu. Signal transduction in a compliant short loop of Henle. International Journal for Numerical Methods in Biomedical Engineering, 28(3):369–380, 2012