Software from our lab

morFeus finds remotely conserved orthologs based on iterative, relaxed, reciprocal BLAST searches and network scoring

HH-MOTiF finds short linear motifs (SLiMs) de novo in proteins using Hidden Markov Model (HMM) comparisons

mitoXplorer is a visual data mining platform for exploring the dynamics of mitochondrial gene expression in a vast amount of NGS-data

AnnoMiner allows you to annotate ChIP-seq data and to perform enrichment analysis using the ENCODE/modERN resources

SLALOM is a suite of python programs for statistical analysis based on positional data in proteins and genomes

viPEr and PEANuT are two Cytoscape 3 apps for focus network analysis

HMMerThread is a data-resource of remotely conserved domains in protein sequences

Git-repository of the lab

check out our code on Git