Publications

2025

1. Rustamov, K. R., Razzokov, J. I., & Baev, A. Y. (2025). Investigation of Structural Mechanisms Underlying p53 Dysfunction Caused by 148 Missense Mutations Using AlphaFold3 and Molecular Dynamics Simulations. Journal of Chemical Information and Modeling. (IF - 5.7)

2. Rustamov, K. R., Makhmudov, A. R., Ikromova, F. R., Vetrova, E. A., Vinokurov, A. Y., Razzokov, J. I., Abramov, A.Y. & Baev, A. Y. (2025). The molecular mechanism of P2Y1 receptor activation by inorganic polyphosphates. Archives of Biochemistry and Biophysics, 110555. (IF – 3.0)

2024

1. Nebesnaya, K.S., Makhmudov, A.R., Rustamov, K.R., Rakhmatullina, N.S., Rustamova, S.I., Mirkhodjaev, U.Z., Charishnikova, O.S., Sabirov, R.Z. and Baev, A.Y.,  (2024) Inorganic polyphosphates regulates functions of thymocytes via activation of P2X purinoreceptors. Biochimica et Biophysica Acta (BBA)-General Subjects: 130523. (IF - 2.8)

2. Rustamov, K. R., & Baev, A. Y. (2024). MSA clustering enhances AF-Multimer's ability to predict conformational landscapes of protein-protein interactions. Bioinformatics Advances, vbae197.  (IF - 2.4)

3. Ikromova F.R., Khasanov F.A., Saidova M.J. Shokirov R.K., Gazieva Sh, Khadjibaev A.M., Tulyaganov D.M., Akalaev R.N., Levitskaya Yu.V., Stopnitskiy A.A. & Baev A.Y. (2024) Acute CCl4-induced intoxication reduces complex I, but not complex II-based mitochondrial bioenergetics – protective role of succinate. J Bioenerg Biomembr. https://doi.org/10.1007/s10863-024-10047-6. (IF - 2.9)

4. Baev, A.Y. Vinokurov, A.Y. Potapova, E.V. Dunaev, A.V. Angelova, P.R. Abramov, A.Y. (2024) Mitochondrial Permeability Transition, Cell Death and Neurodegeneration. Cells, 13, 648. (IF - 5.1)

5. Makhkamov, M., Baev, A., Kurganov, E., & Razzokov, J. (2024). Understanding Osaka mutation polymorphic Aβ fibril response to static and oscillating electric fields: insights from computational modeling. Scientific Reports, 14(1), 22246. (IF - 3.8)

2023

1. Angelova, P. R., Baev, A., Myers, I., & Abramov, A. Y. (2023, November). Interplay of mitochondrial calcium and ROS as a trigger of carbon monoxide-induced brain damage. In FREE RADICAL BIOLOGY AND MEDICINE (Vol. 208, pp. S147-S147). (IF - 7.8)

2. Razzokov, J., Fazliev, S., Makhkamov, M., Marimuthu, P., Baev, A., & Kurganov, E. (2023). Effect of Electric Field on α-Synuclein Fibrils: Revealed by Molecular Dynamics Simulations. International Journal of Molecular Sciences, 24(7), 6312. (IF - 6.2)

2022

1.   Baev, A.Y., Abramov, A.Y. (2022). Inorganic Polyphosphate and F0F1-ATP Synthase of Mammalian Mitochondria. In: Müller, W.E.G., Schröder, H.C., Suess, P., Wang, X. (eds) Inorganic Polyphosphates. Progress in Molecular and Subcellular Biology, vol 61. Springer, Cham. https://doi.org/10.1007/978-3-031-01237-2_1

2.   Baev A.Y., Vinokurov A. Y., Novikova I. N., Dremin V. V., Potapova E. V., Abramov A. Y., Interaction of Mitochondrial Calcium and ROS in Neurodegeneration, Cells. ‒ 2022. ‒ V. 11, № 4;https://doi.org/10.3390/cells11040706; Impact Factor (Web of Sciense) – 7.67

3.   Baev A.Y., Charishnikova O. S., Khasanov F. A., Nebesnaya K. S., Makhmudov A. R., Rakhmedova M. T., Khushbaktova Z. A., Syrov V. N., Levitskaya Y. V., Ecdysterone prevents negative effect of acute immobilization stress on energy metabolism of rat liver mitochondria, J Steroid Biochem Mol Biol. ‒ 2022. ‒ V. 219. ‒ p. 106066; https://doi.org/10.1016/j.jsbmb.2022.106066; Scopus cite score 2022 – 9.9

4.   Kamburova V. S., Ubaydullaeva K. A., Shermatov Sh. E., Buriev Z.T., Charishnikova O. S., Nebesnaya K.S., Sukocheva O. A. Influence of RNA interference of phytochrome A1 gene on activity of antioxidant system in cotton. // Physiological and Molecular Plant Pathology. Elsevier Ltd. 117 (2022) 101751. р.7. Available online 13 November 2021. https://doi.org/10.1016/j.pmpp.2021.101751. Scopus cite score 2022 – 4,2

Previous years

1. Baev A., Angelova P., Abramov A. Inorganic polyphosphate is produced and hydrolyzed in F0F1-ATP synthase of mammalian mitochondria//Biochem J (2020) 477 1515–1524. Scopus cite score 2020 – 6,7

2. H. Baek, A. Sariev, S. Lee, S. -Y. Dong, S. Royer and H. Kim, "Deep Cerebellar Low-Intensity Focused Ultrasound Stimulation Restores Interhemispheric Balance after Ischemic Stroke in Mice," in IEEE Transactions on Neural Systems and Rehabilitation Engineering, vol. 28, no. 9, pp. 2073-2079, Sept. 2020, doi:10.1109/TNSRE.2020.3002207.  Impact Factor (Web of Science) –3.8

3. D. Jung, S. Kim, A. Sariev, F. Sharif, D. Kim, S. Royer, “Dentate granule and mossy cells exhibit distinct spatiotemporal responses to local change in a one-dimensional landscape of visual-tactile cues” Scientific Reports (2019) 9:9545; doi.org/10.1038/s41598-019-45983-6. Impact Factor (Web of Science) –4.38

4. H. Baek, A. Sariev, M. Kim, H. Lee, J. Kim and H. Kim, "A neuroprotective brain stimulation for vulnerable cerebellar Purkinje cell after ischemic stroke: a study with low-intensity focused ultrasound," 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Honolulu, HI, 2018, pp. 4744-4747. doi: 10.1109/EMBC.2018.8513138. Impact Factor (Web of Science) –1.12

5. Ludtmann M. H. R., Angelova P. R., Horrocks M. H., Choi M. L., Rodrigues M., Baev A. Y., Berezhnov A. V., Yao Z., Little D., Banushi B., Al-Menhali A. S., Ranasinghe R. T., Whiten D. R., Yapom R., Dolt K. S., Devine M. J., Gissen P., Kunath T., Jaganjac M., Pavlov E. V., Klenerman D., Abramov A. Y., Gandhi S. alpha-synuclein oligomers interact with ATP synthase and open the permeability transition pore in Parkinson's disease // Nature Communications.‒ 2018. ‒ V. 9, № 1. ‒ pp. 2293.Scopus CiteScore 2018 - 18.1

6. Baev A. Y., Elustondo P. A., Negoda A., Pavlov E. V. Osmotic regulation of the mitochondrial permeability transition pore investigated by light scattering, fluorescence and electron microscopy techniques // Anal. Biochem. ‒ 2018. ‒ V. 552. ‒ pp. 38-44. Scopus, CiteScore 2018 – 4.2

7. Baev A. Y., Negoda A., Abramov A. Y. Modulation of mitochondrial ion transport by inorganic polyphosphate - essential role in mitochondrial permeability transition pore // J BioenergBiomembr.‒ 2017. ‒ V. 49, № 1. ‒ pp. 49-55. Scopus CiteScore 2017 – 4

8. Sariev, A., Chung, J., Jung, D., Sharif, F., Lee, J.Y., Kim, S., Royer, S. “Implantation of Chronic Silicon Probes and Recording of Hippocampal Place Cells in an Enriched Treadmill Apparatus.” Journal of Vis. Exp. e56438, doi:10.3791/56438 (2017)

9. Plamena R. Angelova, Artyom Y. Baev, Alexey V. Berezhnov and Andrey Y. Abramov. Role of inorganic polyphosphate in mammalian cells: from signal transduction and mitochondrial metabolism to cell death.// Biochemical Society Transactions (2016) Volume 44, part 1, DOI:10.1042/BST20150223. Scopus CiteScore 2016 – 5.7

10. Artyom Y. Baev, Plamena R. Angelova and Andrey Y. Abramov. Role of Inorganic Polyphosphate in the Cells of the Mammalian Brain// Chapter 8 in ‘Inorganic Polyphosphates in Eukaryotic Cells’ book, Editors Tatiana Kulakovskaya, Evgeny Pavlov, Elena N. Dedkova, pages 115-122, Springer, 2016

11. Holmström K. M., Marina N., Baev A. Y., Wood N. W., Gourine A. V., Abramov A. Y. Signalling properties of inorganic polyphosphate in the mammalian brain // Nature Communications‒ 2013. ‒ V. 4, ‒ pp. 1362.ResearchGate, IF – 12.03