Publications

Statistical Methodology

  1. Plantinga A, Zhan X, Zhao N, Jenq RR, Wu MC (2017). MiRKAT-S: A community-level test of association between the microbiota and survival times. Microbiome 5(17).
  2. Zhan X, Zhao N, Plantinga A, Thornton TA, Conneely KN, Epstein MP, Wu MC (2017). Powerful Genetic Association Analysis for Common or Rare Variants with High Dimensional Structured Traits. Genetics 206.4: 1779-1790.
  3. Zhan X, Plantinga A, Zhao N, Wu MC (2017). A fast small-sample kernel independence test for microbiome community-level association analysis. Biometrics 73.4 (2017): 1453-1463.


Collaborative Research: Microbiome

  1. Golob JL, Pergam SA, Srinivasan S, Liu C, Garcia K, Ko D, Aker S, Marquis S, Loeffelholz T, Plantinga A, Wu MC, Celustka K, Morrison A, Woodfield M, Fredricks DN (2017). The Stool Microbiota at Neutrophil Recovery is Predictive for Severe Acute Graft versus Host Disease after Hematopoietic Cell Transplantation. Clinical Infectious Diseases 65.12: 1984-1991.
  2. Mitchell CM, Srinivasan S, Plantinga A, Wu MC, Reed SD, Guthrie KA, LaCroix AZ, Fiedler T, Munch M, Liu C, Hoffman NG, Blair IA, Newton K, Freeman EW, Joffe H, Cohen L, Fredricks DN (2017). Associations between improvement in genitourinary symptoms of menopause and the vaginal ecosystem. Menopause.


Collaborative Research: Human Population Genetics

  1. Schick UM, Jain D, Hodonsky CJ, Morrison JV, Davis JP, Brown L, Sofer T, Conomos MP, Schurmann C, Nelson S, Vadlamudi S, Stilp A, Plantinga A, Baier L, Bien SA, Gogarten S, Laurie C, Taylor KD, Liu Y, Auer PL, Franceschini N, Szpiro A, Rice K, Kerr KF, Rotter JI, Hanson R, Papanicolaou G, Rich SS, Loos RJF, Browning B, Browning S, Weir B, Laurie C, Mohlke K, North KE, Thornton TA, Reiner AP (2016). Genome-wide association study of platelet count identifies ancestry-specific loci in Hispanic/Latino Americans. The American Journal of Human Genetics 98(2): 229-242.
  2. Browning, SR, Grinde, K, Plantinga A, Gogarten SM, Stilp, AM, Kaplan, RC, Avil├ęs-Santa ML, Browning BL and Laurie CC (2016). Local Ancestry Inference in a Large US-Based Hispanic/Latino Study: Hispanic Community Health Study/Study of Latinos (HCHS/SOL). G3: Genes | Genomes | Genetics 6(6): 1525-1534.
  3. Stamatoyannopoulos G, Bose A, Teodosiadis A, Tsetsos F, Plantinga A, Psatha N, Zogas N, Yannaki E, Zalloua P, Kidd KK, Brian BL, Stamatoyannopoulos JA, Paschou P, Drineas P (2017). Genetics of the Peloponnesean Populations and the Theory of Extinction of the Medieval Peloponnesean Greeks. European Journal of Human Genetics 25(5): 637-645.