Publicaciones

Publicaciones 2017 - 2022

Sierra, J. A., Escobar, J. S., Corrales-Agudelo, V., Lara-Guzmán, O. J., Velásquez-Mejía, E. P., Henao-Rojas, J. C., Caro-Quintero A., Vaillant F. & Muñoz-Durango, K. (2022). Consumption of golden berries (Physalis peruviana L.) might reduce biomarkers of oxidative stress and alter gut permeability in men without changing inflammation status or the gut microbiota. Food Research International, 111949.

Hernández, R., De Mares, M. C., Jimenez, H., Reyes, A., & Caro-Quintero, A. (2022). Functional and Phylogenetic Characterization of Bacteria in Bovine Rumen Using Fractionation of Ruminal Fluid. Frontiers in microbiology, 13. DOI:10.3389/fmicb.2022.813002

Hernández R., Jimenez H., Vargas-Garcia C., Caro-Quintero A., Reyes A. (2021).Disentangling the Complexity of the Rumen Microbial Diversity Through Fractionation Using a Sucrose Density Gradient. Frontiers in Microbiology, 12, 1883. DOI:10.3389/fmicb.2021.664754

Simbaqueba, J., Rodriguez, E. A., Burbano, D. M., Gonzalez, C., & Caro-Quintero, A (2021). Putative Novel Effector Genes Revealed by the Genomic Analysis of the Phytopathogenic Fungus Fusarium oxysporum f. sp. physali (Foph) That Infects Cape Gooseberry Plants. Frontiers in Microbiology. 2020 ;11:593915. DOI: 10.3389/fmicb.2020.593915.

Santos-Torres, M., Romero-Perdomo, F., Mendoza-Labrador, J., Gutiérrez, A. Y., Vargas, C., Castro-Rincon, E., Caro-Quintero, A... & Estrada-Bonilla, G. A. (2021). Genomic and phenotypic analysis of rock phosphate-solubilizing rhizobacteria. Rhizosphere, 17, 100290.

Rodriguez-Castaño, G. P., Rey, F. E., Caro-Quintero, A., & Acosta-González, A. (2020). Gut-derived Flavonifractor species variants are differentially enriched during in vitro incubation with quercetin. PloS one, 15(12), e0227724.

Pacheco-Montealegre, M. E., Dávila-Mora, L. L., Botero-Rute, L. M., Reyes, A., & Caro-Quintero, A. (2020). Fine resolution analysis of microbial communities provides insights into the variability of cocoa bean fermentation. Frontiers in microbiology, 11, 650.

Ruiz-Moreno, H. A., López-Tamayo, A. M., Caro-Quintero, A., Husserl, J., & Barrios, A. F. G. (2019). Metagenome level metabolic network reconstruction analysis reveals the microbiome in the Bogotá River is functionally close to the microbiome in produced water. Ecological Modelling, 399, 1-12.

Deng, J., Auchtung, J. M., Konstantinidis, K. T., Caro-Quintero, A., Brettar, I., Höfle, M., & Tiedje, J. M. (2018). Divergence in gene regulation contributes to sympatric speciation of Shewanella baltica strains. Applied and environmental microbiology, 84(4).

Pacheco-Montealegre, M., Patiño, R. E., Torres, L., Jiménez, S., Rodríguez, J. L., & Caro-Quintero, A. (2017). The draft genome of Brucella abortus strain Ba col-B012, isolated from a dairy farm in Nariño, Colombia, bring new insights into the epidemiology of biovar 4 strains. Standards in genomic sciences, 12(1), 1-9.

Díaz-Cárdenas, C., Bernal, L. F., Caro-Quintero, A., López, G., Alzate, J. D., Gonzalez, L. N., ... & Baena, S. (2017). Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring. International journal of systematic and evolutionary microbiology, 67(10), 3744-3751.

Publicaciones anteriores

Rodriguez-Castano, G. P., Caro-Quintero, A., Reyes, A., & Lizcano, F. (2016). Advances in Gut Microbiome research, opening new strategies to cope with a Western lifestyle. Frontiers in Genetics, 7, 224.

Moeller, A. H., Caro-Quintero, A., Mjungu, D., Georgiev, A. V., Lonsdorf, E. V., Muller, M. N., ... & Ochman, H. (2016). Cospeciation of gut microbiota with hominids. Science, 353(6297), 380-382.

Caro-Quintero, A., & Ochman, H. (2015). Assessing the unseen bacterial diversity in microbial communities. Genome biology and evolution, 7(12), 3416-3425.

Bristow, L. A., Sarode, N., Cartee, J., Caro‐Quintero, A., Thamdrup, B., & Stewart, F. J. (2015). Biogeochemical and metagenomic analysis of nitrite accumulation in the G ulf of M exico hypoxic zone. Limnology and Oceanography, 60(5), 1733-1750.

Caro-Quintero, A., & Konstantinidis, K. T. (2015). Inter-phylum HGT has shaped the metabolism of many mesophilic and anaerobic bacteria. The ISME journal, 9(4), 958-967.

Caro-Quintero, A., Auchtung, J., Deng, J., Brettar, I., Höfle, M., Tiedje, J. M., & Konstantinidis, K. T. (2012). Genome sequencing of five Shewanella baltica strains recovered from the oxic-anoxic interface of the Baltic Sea.

Caro‐Quintero, A., & Konstantinidis, K. T. (2012). Bacterial species may exist, metagenomics reveal. Environmental microbiology, 14(2), 347-355.

Caro-Quintero, A., Ritalahti, K. M., Cusick, K. D., Löffler, F. E., & Konstantinidis, K. T. (2012). The chimeric genome of Sphaerochaeta: nonspiral spirochetes that break with the prevalent dogma in spirochete biology. MBio, 3(3), e00025-12.

Oh, S., Caro-Quintero, A., Tsementzi, D., DeLeon-Rodriguez, N., Luo, C., Poretsky, R., & Konstantinidis, K. T. (2011). Metagenomic insights into the evolution, function, and complexity of the planktonic microbial community of Lake Lanier, a temperate freshwater ecosystem. Applied and environmental microbiology, 77(17), 6000-6011.

Caro-Quintero, A., Deng, J., Auchtung, J., Brettar, I., Höfle, M. G., Klappenbach, J., & Konstantinidis, K. T. (2011). Unprecedented levels of horizontal gene transfer among spatially co-occurring Shewanella bacteria from the Baltic Sea. The ISME journal, 5(1), 131-140.

Caro-Quintero, A., Rodriguez-Castaño, G. P., & Konstantinidis, K. T. (2009). Genomic insights into the convergence and pathogenicity factors of Campylobacter jejuni and Campylobacter coli species. Journal of bacteriology, 191(18), 5824-5831.