Program Curriculum

Overview of Curriculum

The University of Minnesota Infectious Diseases Fellowship Program will help you achieve mastery of the practice and science of Infectious Diseases and provide you comprehensive training in research skills, all in a friendly and supportive working environment. Clinical excellence will be attained by immersion in patient care at our three dedicated teaching hospitals: M Health Fairview University of Minnesota Medical Center - East Bank, Hennepin County Medical Center, and Minneapolis VA Medical Center, with emphasis upon the development of critical reasoning, scholarship, and professional responsibility.

Additionally, you will benefit from our robust teaching, an exceptionally supportive learning environment, strong faculty mentorship and tremendous flexibility within the program to accommodate the diverse interests of our fellows. Excellence in research will be achieved by the design, implementation, analysis and presentation of a high-quality research project, enthusiastic and supportive research mentors, and rigorous oversight. Whether your research interests include HIV, issue of global health, infections of transplantation, or hospital-acquired infections using basic, clinical or epidemiological methods, our faculty offer a diverse range of research opportunities.


Clinical Training (11 months direct patient contact, plus continuity clinic)

Required Inpatient Rotations (10 months)

MHealth Fairview University of Minnesota Medical Center - East Bank (UMMC): 4 months

Minneapolis Veterans Affairs Medical Center (VA): 3 months

Hennepin County Medical Center (HCMC): 3 months

Elective Inpatient Rotations

MHealth Fairview University of Minnesota Medical Center - West Bank 

MHealth Fairview University of Minnesota Masonic Children's Hospital (Peds ID)

Additional months/experiences at UMMC, VA or HCMC

Required Outpatient Rotations

Ambulatory continuity clinic (1 half-day per week for duration of fellowship)

M Health Fairview Clinics and Surgery Center

Positive Care Center, Hennepin Healthcare

Infectious Diseases Institute, Makarere University, Kampala, Uganda


Orientation: 2 months

Multiple Outpatient Clinics


Required Clinical Microbiology (longitudinal)

VA Clinical Microbiology Lab (One week during Orientation)

Hennepin Clinical Microbiology Lab (Two weeks during Orientation)

Regularly scheduled plate rounds at hospitals during inpatient rotations


Required Research

Development of an in-depth research project on a topic of Infectious Diseases significance, with faculty mentoring the fellow. Training includes opportunities in project design, writing up and defending a research proposal, data collection methods and analyses, presentation of findings at local research conferences and/or regional or national meeting, and writing up results for publication in a peer-reviewed journal.

Clinical Scholar Track: 6-12 months

Academic Research Track: 24-36 months


Required Quality Improvement Project (ACGME Requirement)

Experience on the UMMC Antimicrobial Management Team

Experience at the MVAMC Antimicrobial Stewardship Team

Many fellows incorporate quality improvement aspects into their primary or secondary research project


Orientation Block

Incoming fellows participate in the Orientation Block each July and August. During the course of these months, fellows participate in various outpatient experiences, receive critical didactic lectures from senior fellows and faculty, begin their continuity clinic, and participate in our online Global Health curriculum.


CLINIC ROTATIONS

Hennepin County Public Health Clinic (HCPHC)

Health Services Building, 4th floor, 525 Portland Avenue South, Minneapolis, MN 55415

612-543-5555

Fellows rotate with either Drs. Rock or Shaughnessy in the TB clinic or with several Nurse Practitioners in the Red Door/STI Clinic (both clinics are in the same space).

Clinic starts at 8AM (morning session) or 1PM (afternoon session)


International Travel Medicine Clinic, Hennepin County Medical Center

915 South 7th Street, Blue Building, Level 1, B1.290 Minneapolis MN 55415

You will work with Dr. Megan Shaughnessy and Dr. Becky Zadroga


Clinic and Surgery Center (CSC)

Clinics and Surgery Center (CSC), Third Floor, 909 Fulton Street SE, Minneapolis, MN 55455

612-625-4680

Fellows rotate with either Drs., Kline, Cavert, Leuck, Obeid, Young, and others

Clinic starts at 8AM (morning session) or 1PM (afternoon session)


Antimicrobial Management Team (AMT)

This service is based at UMMC and is run by Kim Boeser. Contact Kim in advance so you know where to meet on your AMT day. She can be reached at kvarejc1@fairview.org or 612-273-6331 (work) or 

612-899-6407 (pager).


CLINICAL MICROBIOLOGY LAB INTENSIVE

Fellows spend 2 weeks during the Orientation Block under the guidance of Glen Hansen.


VAMC CLINICAL MICROBIOLOGY LAB 

Spend one week during the Orientation Block in the Clinical Microbiology Lab at VAMC under the guidance of Brad Wigdon.


HHS ID-2 Service

Spend 1-2 weeks during the Orientation Block on the ID-2 service learning inpatient ID consult on this faculty-only service. Patients are drawn from the surgical, OB, Family Practice, and psychiatric services.


UMN Orange ID Service

Spend 2 weeks during the Orientation Block on the Orange ID service learning inpatient ID consult on this faculty-only service. The fellow will also learn to work with ID APPs.


INDEPENDENT STUDY: SPECIALTY SERIES IN GLOBAL HEALTH INFECTIOUS DISEASE

Beth Scudder (612-625-6417 or bscudder@umn.edu) sets up access to the online content of the Global Health Course for all of the fellows. The expectation is that fellows work through the Specialty Series in Global Health: Infectious Disease by the time our Clinical Competency Committee meeting occurs in October. It is a 40-hour course. The idea is for you to get as much completed during the Orientation Block; any remaining lectures can be completed on the fellow’s own time.


BOOTCAMP LECTURES

These lectures are geared towards incoming fellows and focus on ID emergencies, fundamentals of ID, and fellowship pearls. Lectures are given by both senior fellows and faculty.



Clinical Microbiology Training

Training includes a one-week rotation at the VAMC Clinical Microbiology Lab and a two-week rotation with Glen Hansen during the ID Orientation Block. The key aspect of these rotations is hands-on experience in clinical bacteriology, mycology, and parasitology, by working with microbiology technicians on actual patient samples. Emphasis is placed on the practical details of processing clinical microbiological specimens and accurate interpretation of results.  This practical experience is augmented by self-study materials available at each institution, including web-based learning and microbiology texts.  Short lectures are also given by microbiology staff.


Additional clinical microbiology training and exposure is provided during the clinical inpatient rotations, which include close consultation with the microbiology laboratory. The details of this consultation vary by institution, but typically involve daily or weekly microbiology rounds and discussions of clinical specimens.



Inpatient Consultation Rotations

Fellows typically spend the majority of their first year and at least three months in their second year on the Infectious Diseases inpatient consult service (These schedules are flexible to meet the needs of the fellow). In general, clinical rotations involve a 1-month block of time at a particular site. The schedule provides clinical exposure to diverse patient populations and familiarity with the faculty members at each site within the Fellowship Program. The inpatient service consult teams include the fellow and an Infectious Diseases attending. The team may also include one or more Medicine or Medicine/Pediatric residents, third or fourth year medical students, and/or pharmacists or other subspecialists in training.


The inpatient consult service involves initial consultation and follow-up of patients with a wide range of Infectious Diseases problems. Rounds are held daily with the attending, and involve close interaction with the microbiology laboratory and the infection control service. In addition to consultative work, fellows will be involved in the teaching and supervision of medical house staff, and residents and students taking the Infectious Diseases rotation. Fellows will participate in case presentations at Infectious Diseases Clinical Conferences assigned to the hospital at which the fellow is rotating.


According to ACGME program requirements, appropriate faculty supervision of the fellows must be provided during all their educational experiences.  During their inpatient consult months, all fellows will be supervised by a faculty member from IDIM who is located at the institution where the fellow is rotating. (See also Trainee Responsibility and Supervision.)


The fellow and the attending both carry a pager while on-call for the inpatient consult service. Evening and weekend duties vary by service. Fellows take two weekends of call per month (starting 5:30 PM Friday), presuming no leave or vacation is taken during the month and the fellow is not scheduled for academic conference time over a weekend. The fellow’s specific weekends off should be arranged with the on-service attending before the month begins. All fellows also have three weeks of vacation per year. Vacation time off should be arranged well in advance with the fellowship director, coordinator and the directors of the clinical services at which the fellows will be rotating (see above section on vacation and leave).



Continuity Clinic

The fellow’s weekly half-day continuity clinic will be either at the M Health Fairview Clinics and Surgery Center (CSC) on Fulton Street at the University of Minnesota or the Positive Care Clinic at the Hennepin County Medical Center. At the CSC, the fellow will participate in Fellows’ Clinic; Dr Winston Cavert is the primary mentor at this site. Alternatively, a fellow may be assigned to a specific faculty for their continuity clinic. At HCMC, fellows will be assigned one half-day clinic per week with a specific either Dr Jessica Oswald or Dr Nicholas Vogenthaler. For fellows conducting research in Kampala, Uganda, continuity clinic will be performed at the Infectious Diseases Institute at Makerere University College of Health Sciences.



Other Outpatient Experience

The outpatient clinic experience is an integral feature of the fellows’ training program.  In addition to the weekly half-day continuity clinic that fellows participate in during the entirety of the fellowship, there are multiple ambulatory care experiences during the Orientation Block, and outpatient components during the inpatient consults months at VAMC and during the first-year VAMC research months. Fellows on the VAMC consult rotation, or doing a first year VAMC research month, spend Wednesday, Thursday, or Friday mornings in the Infectious Diseases Pool Clinic, supervised by the ID staff members in the clinic that day.



Research Training

An appropriate, focused, and productive research experience for each fellow is a primary goal of the Infectious Diseases program at the University of Minnesota. The research experience begins with three dedicated research months at the VAMC during the first year. The division appreciates that the fellow’s research experience may well determine the direction of his/her subsequent career. Consequently, this component of the fellowship is given great care and attention.  Each fellow is instructed to discuss his/her interests and research options with all relevant faculty members individually and with the division director and fellowship director before making a commitment to a particular project or mentor.  These discussions are intended to assure the focus, feasibility, and suitability for the particular fellow of a proposed project.


Fellows in the (two-year) Clinician-Scholar track will have up to 9 months during their second year to focus primarily on clinical research and scholarly projects, while maintaining some clinical activities. This research activity must be VAMC based. Fellows in the (three or four-year) academic research track will devote most of year two and all of years three and four to focused research activities and related training. Fellows in either track may decide to engage in basic, epidemiological or clinical research. The ID division can provide appropriate guidance in each of these areas.  The main requirement is that the research be of the highest possible quality and provide a credible base for further relevant work, including future employment. For academic research track fellows, specialized training in epidemiological and clinical research may be available through the University of Minnesota School of Public Health, partially supported by the division's NIH- sponsored T32 training grant (see below).


During the summer or fall of the first year each fellow should identify a primary faculty mentor. The primary mentor usually, but not necessarily, will be a member of the Division of Infectious Diseases. The primary mentor will be responsible for helping the fellow plan and carry out his/her research project, overseeing the fellow’s progress during the research years, and assisting with future career planning, including the employment search and interview process.


With the assistance of the mentor, each fellow should next select a research project and assemble a research committee, which typically will consist of at least two faculty members in addition to the primary mentor. The other committee members can contribute expertise in areas relevant to the fellow's project that complement the strength areas of the primary mentor. The other committee members also provide an objective, outside perspective on the research project itself and on the fellow’s progress with it. Committee members may be selected from outside the Division of Infectious Diseases, such as from the School of Public Health, the Department of Microbiology, the Dental School or another division within the Department of Medicine. If the primary mentor is not an Infectious Diseases faculty member, at least one other committee member must be. The fellow should meet quarterly with the research committee to review progress and plan next steps.


Fellows, in coordination with the primary mentor, are responsible for seeking Human Subjects Committee and other required approvals before beginning work on their project.  Fellows are encouraged to present their preliminary or final results at internal research conferences and/or regional or national meetings.


To provide centralized oversight of fellows' academic progress, the program has established a Scholarship Oversight Committee (SOC) which will systematically review the progress of all fellows semiannually (January and June). Fellows are expected to present to the SOC their research plan at its inception and to review with the committee their progress and productivity semiannually, according to a checklist that addresses research activity, publications, presentations, coursework, grant applications, etc. Please see Evaluations and Outcomes Assessment for further information on the SOC.

 


Funding of Research

There are currently two main avenues to fund research in the program NIH Training Grant and the Minneapolis VA Medical Center.


Veterans Health Administration Clinical Research

The Minneapolis VA provides funding for research rotations for projects that support the mission of VHA and enhance the quality of health care delivery to Veterans. This research is clinical in nature and can focus on quality improvement. An overview of this process will be given during the Orientation Block for the program. This is available to any ID fellow in the program.


NIH Training Grant: Infectious Diseases Training in Clinical Investigation

Because of the increased need for Infectious Diseases clinical investigators who can address the growing crisis of "Emerging and Re-emerging Infections", the Division of Infectious Diseases at the University of Minnesota Medical School offers a training track for fellows interested in acquiring skills in the areas of clinical epidemiology and clinical trials research. This multidisciplinary, NIH-supported T32 Training Program draws upon many University of Minnesota faculty members and colleagues at the Minnesota Department of Health. Fellows entering this two or three-year training track will generally be second year fellows who have completed a clinical year of adult or pediatric Infectious Diseases training. In addition to working with a primary mentor and a research advisory committee on a research project(s) related to an Emerging Infectious Diseases topic, T32-supported fellows may petition for support in taking selected courses in the School of Public Health, applicable to either a Master of Public Health (MPH) degree (for fellows interested primarily in epidemiology-focused research) or a Master of Science in Clinical Research (MS-CR) degree (for fellows interested in clinical trials or other clinically-based research). 


Selection of a Primary Mentor is encouraged early in the first year of clinical training. Primary mentor participants include faculty from the Departments of Medicine, Pediatrics, and Microbiology, the School of Public Health, the School of

Dentistry, the College of Veterinary Medicine, the School of Pharmacy, the Center for Infectious Diseases Research and Policy, and the Minnesota Department of Health. 


This training grant has four slots available per academic year for qualified fellows. Fellows are eligible for NIH-sponsored training grants for up to three years (this includes institutional T32 training grants and individual (F32) training grants). The principal investigator responsible for this grant is Dr David Boulware (boulw001@umn.edu).


This is the primary method of supporting the research years of Academic Research Track fellows.


To qualify for a T32 slot, the trainee must be a US citizen or permanent resident enrolled in a research or clinical doctoral or postdoctoral program. The mentor must be an established investigator capable of providing administrative and scientific leadership. 



Fogarty Global Health Fellowship

Northern/Pacific Global Health Research Fellows Training Consortium

The Global Health Fellowship Program, supported by the National Institutes of Health’s Fogarty International Center (FIC), provides fellows 12 months of international clinical research training, with international partnerships in Kenya, Cameroon, Uganda, Ghana, Peru, Thailand and China. The program provides stipend support, modest research training costs, travel costs to and from the international collaborating country, and an orientation at NIH in July.

 

This is a tremendous source of research support for our Infectious Diseases fellows interested in Global Health research. Additional years of research training for Academic Research Track fellows are provided by the T32 training program.

 

For further information regarding the Global Health Fellowship Program, please visit the University of Minnesota site here or contact the co-principal investigator for this grant, Dr Shailey Prasad.

 



Sample Block Schedule

The program sample block schedule is available here.


ACGME Competencies

The ACGME defines the competencies for this subspecialty as follows.


Patient Care

Fellows must be able to provide patient care that is compassionate, appropriate, and effective for the treatment of health problems and the promotion of health.

Medical Knowledge

Fellows must demonstrate knowledge of established and evolving biomedical, clinical, epidemiological and social-behavioral sciences, as well as the application of this knowledge to patient care

Practice-based Learning and Im­provement

Fellows must demonstrate the ability to investigate and evaluate their care of patients, to appraise and assimilate scientific evidence, and to continuously improve patient care based on constant self-evaluation and lifelong learning.

Interpersonal and Communication Skills

Fellows must demonstrate interpersonal and communication skills that result in the effective exchange of information and collaboration with patients, their families, and health professionals.


Professionalism

Fellows must demonstrate a commitment to professionalism and an adherence to ethical principles.

Systems-based Practice

Fellows must demonstrate an awareness of and responsiveness to the larger context and system of health care, including the social determinants of health, as well as the ability to call effectively on other resources to provide optimal health care.


Competency-Based Goals & Objectives 

The Competencies provide a conceptual framework describing the required domains for a trusted physician to enter autonomous practice. These Competencies are core to the practice of all physicians and are further defined by the subspecialty. The developmental trajectories in each of the Competencies are articulated through the Milestones for each subspecialty. The focus in fellowship is on subspecialty-specific patient care and medical knowledge, as well as refining the other competencies acquired in residency. Levels of competency are described as "Junior" and "Senior." Junior is the first clinical rotational experience a fellow experiences at a sight; Senior are the subsequent rotations.


"Junior" Fellowship Experience

 

Patient care

History and Physical Examination

 

Management of Patients with Possible and Proven Infectious Diseases

 

Consultative Care

 

Medical Knowledge

Diagnostic Reasoning

 

Diagnostic Evaluation

 

Treatment and Therapeutics including Anti-Infectives, Immunoprophylaxis, and Adjunctive Therapies

 

Infection Control/Prevention, Antimicrobial Stewardship, and Epidemiology

 

Pathophysiology and Foundational Science

 

Scholarly Activity

Plans a scholarly activity

 

Systems-Based Practice

Patient Safety

 

Quality Improvement

 

Coordination and Transitions of Care

 

Population Health

 

Physician Role in Health Care Systems

 

Practice-Based Learning and Improvement

Evidence-Based and Informed Practice

 

Reflective Practice and Commitment to Personal Growth

 

Professionalism

Professional Behavior

 

Ethical Principles

 

Accountability/Conscientiousness

 

Well-Being

 

 

Interpersonal and Communication Skills

Patient- and Family-Centered Communication

 

Interprofessional and Team Communication

 

Communication within Health Care Systems

 


"Senior" Fellowship Experience


Patient Care

History and Physical Examination

 

Management of Patients with Possible and Proven Infectious Diseases

 

Consultative Care

 

Medical Knowledge

Diagnostic Reasoning

 

Diagnostic Evaluation

 

Treatment and Therapeutics including Anti-Infectives, Immunoprophylaxis, and Adjunctive Therapies

 

Infection Control/Prevention, Antimicrobial Stewardship, and Epidemiology

 

Pathophysiology and Foundational Science

 

Scholarly Activity

 

Systems-Based Practice

Patient Safety

 

Quality Improvement

 

Coordination and Transitions of Care

 

Population Health

 

Physician Role in Health Care Systems

 

 

Practice-Based Learning and Improvement

Evidence-Based and Informed Practice

 

Reflective Practice and Commitment to Personal Growth

 

 

Professionalism

Professional Behavior

 

Ethical Principles

 

Accountability/Conscientiousness

 

Well-Being

 

 

Interpersonal and Communication Skills

Patient- and Family-Centered Communication

 

Interprofessional and Team Communication

 

Communication within Health Care Systems

 

 

Didactics / Conferences

All didactics and conferences are virtual unless noted otherwise.


Regularly Scheduled Series 


Citywide ID Clinical Case Conference 

Tuesdays 7:30-8:30 AM, via Zoom

 

Infection and Immunity Research Conference (IIRC)

These are held September to May each year, on Tuesdays 12:00-1:00 PM, and Thursdays 8:00-9:00 AM. The purpose is to promote interdisciplinary interactions among highly accomplished teams of investigators with expertise in Infectious Diseases, Microbiology and Immunology. Presenters typically have expertise or are learners in microbial pathogenesis, immunology and cancer biology (topic of choice). The audience is usually a mixture of basic scientists, clinical faculty and their students and postdocs.


 

Infectious Diseases Didactics

4-hour blocks monthly, 8a-12p, protected academic time available via Zoom

Fellows will receive Google calendar invites for these sessions and have access to the schedule with details and educational links. Attendence is recorded for compliance purposes.



DOM Shared Curriculum 

These sessions are scheduled for all Department of Medicine Fellows to provide education on common topics and may be in person. Attendance is mandatory. 


Annual Conferences

Infectious Diseases Fellows are expected to attend the following conferences.


Emerging Infections in Clinical Practice

The goal is to provide state-of-the-art talks and roundtable discussions on topics of highest priority in the field of Emerging Infections and Bioterrorism, presented by U of M faculty, the Minnesota Department of Health and national experts. Infectious Diseases fellows are provided free registration and are expected to attend and participate in the discussions. This is usually held on a Friday in November and fellows are excused from clinical duties to attend. 

 

Mayo Clinic / UMN Infectious Diseases Fellows’ Forum

This meeting, which occurs in the Spring in Rochester, MN, or at UMN involves ID fellows from across the country. It includes research presentations by fellows, faculty lectures, and a career-planning component. Fellows are excused from clinical duties to attend. 

 

Spink and Wannamaker Lectures

These two annual lectures bring world authorities in Infectious Diseases to the University of Minnesota as guest lecturers. Fellows meet informally with the visiting professors to discuss their research and career plans. 

The Wesley Spink Memorial Lecture is coordinated through the Department of Medicine and is usually scheduled in November. The lecture is conducted during a Thursday Grand Rounds slot (1205 -1pm). Fellows are also expected to attend the informal gathering with the guest lecturer the night before. 

The Lewis W Wannamaker Memorial Lecture is conducted by the Department of Pediatrics and is currently on hold.

 

Robert P. Hebbel Department of Medicine Research Day 

This is usually held in May. Fellows present their research at an evening poster session (along with presenters from UMMC, VAMC, HCMC, ANW, and Regions), and can attend a lunch lecture and discussion with the designated distinguished visiting professor. 


 

Infectious Diseases Society of America Annual Meeting

Fellows are excused to attend this ID Week annual conference and are granted a travel budget at the beginning of each academic year. All fellows are encouraged to submit abstracts which are usually due in May. Weekend attendance of this meeting takes the place of a weekend of call for any fellow on a clinical rotation during the month of ID Week.


In-Training Examination 

Fellows should take the In-Training Examination (ITE) twice during their fellowship program. The program will cover the cost for two examinations.  The results of the test assist fellows as well as the fellowship program director to identify strengths and weaknesses of both the fellow and the training program. The exam is offered annually the first Tuesday in February. This exam should not be considered high-stakes, but be used as a tool to assess the competency of your medical knowledge.