The Molecular Signatures Database (MSigDB) is a resource of tens of thousands of annotated gene sets for use with GSEA software, divided into Human and Mouse collections.
The in-silico predicted matrisome lists and experimentally-derived matrisome signatures are deployed as gene sets via MSigDB and can be found under the curated collections (C2 and M2) and below.
NABA_CORE_MATRISOME
NABA_ECM_GLYCOPROTEINS
NABA_PROTEOGLYCANS
NABA_MATRISOME_ASSOCIATED
NABA_SECRETED_FACTORS
NABA_BASEMENT_MEMBRANES
NABA_MATRISOME_POORLY_METASTATIC_MELANOMA
NABA_MATRISOME_POORLY_METASTATIC_MELANOMA_TUMOR_CELL_DERIVED
NABA_MATRISOME_HIGHLY_METASTATIC_MELANOMA
NABA_MATRISOME_HIGHLY_METASTATIC_MELANOMA_TUMOR_CELL_
NABA_MATRISOME_PRIMARY_METASTATIC_COLORECTAL_TUMOR
NABA_MATRISOME_METASTATIC_COLORECTAL_LIVER_METASTASIS
NABA_MATRISOME_HGSOC_OMENTAL_METASTASIS
Xenograft samples
NABA_MATRISOME_POORLY_METASTATIC_BREAST_CANCER
NABA_MATRISOME_POORLY_METASTATIC_BREAST_CANCER_TUMOR_
CELL_DERIVED
NABA_MATRISOME_HIGHLY_METASTATIC_BREAST_CANCER
NABA_MATRISOME_HIGHLY_METASTATIC_BREAST_CANCER_TUMOR_
HEBERT_MATRISOME_TNBC_LUNG_METASTASIS
HEBERT_MATRISOME_TNBC_LUNG_METASTASIS_TUMOR_CELL_
HEBERT_MATRISOME_TNBC_BONE_BRAIN_LIVER_LUNG_METASTASES
HEBERT_MATRISOME_TNBC_BONE_BRAIN_LUNG_LIVER_METASTASES_TUMOR_CELL_DERIVED
HEBERT_MATRISOME_TNBC_BONE_METASTASIS
HEBERT_MATRISOME_TNBC_BONE_METASTASIS_TUMOR_CELL_
DERIVED
HEBERT_MATRISOME_TNBC_BRAIN_METASTASIS
HEBERT_MATRISOME_TNBC_BRAIN_METASTASIS_TUMOR_CELL_
DERIVED
HEBERT_MATRISOME_TNBC_LIVER_METASTASIS
DI_MARTINO_MATRISOME_HIGHLY_PROLIFERATIVE_HNSCC
DI_MARTINO_MATRISOME_HIGHLY_PROLIFERATIVE_HNSCC_TUMOR_