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Drug-SNPing
An integrated drug-, protein interacting-, and tagSNP-based pharmacogenomics platform for SNP genotyping
User Manual v1.0
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Table of content
2. Query results for DrugBank-based in the pipeline
2.1. In the example of AHF for synonym input (DrugBank)
2.1.1. The query results for drug information
2.1.2. The query results for the drug targets, metabolizing enzymes, drug transporters, and drug carriers
2.1.2.1. Drug targets (Clicking arrow line 1 in Fig. 6)
2.1.2.2. Metabolizing enzymes (Clicking arrow line 2 in Fig. 6)
2.1.2.3. Drug transporters
2.1.2.4. Drug carriers
2.1.3. The query results for the interactive genes
2.1.4. The query results for STRING interaction
2.2. In the example of FMO3 for HUGO gene name input
2.2.1. The query results for drug information
2.2.2. Gene name (HUGO) searching problem in DrugBank
2.2.3. Gene name (HUGO) searching is improved in Drug-SNPing
3. Query results for PharmGKB-based in the pipeline
3.1. In the example of Anticholinesterases for drug input
3.1.1. The query results for drug information
3.1.2. STRING information (Clicking arrow line 3 in Fig. 25)
3.1.3. The query results for the interactive genes
4. Outputs for SNP genotyping information
4.1. The query results for the interactive genes
4.2. NCBI SNP selection and HapMap tagSNPs
4.2.1. NCBI SNP selection (clicking arrow line 1 in Fig. 31)
4.2.2. HapMap tagSNPs (clicking arrow line 2 in Fig. 42)
4.3. PharmGKB information
4.4. TagSNP genotyping information
4.5. Representative results for SNP genotyping information
4.5.1. SNP fasta information
4.5.2. TaqMan probe information
4.5.3. Natural primer information
4.5.4. Enzyme Information
4.5.5. Mutagenic primer information
5.1. Representative query results in the pipeline of the Drug-SNPing
5.2. Representative outputs for SNP genotyping information in the Drug-SNPing
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