This study examined the effects of a glyphosate-based herbicide on early life stages of Nile tilapia, revealing dose-dependent reductions in hatching rates, increased mortality, and developmental deformities. Using OCT, we non-invasively visualized structural abnormalities, while biochemical assays showed reduced acetylcholinesterase expression and digestive enzyme activity, indicating neurotoxicity and metabolic disruption. The findings highlight the ecological risks of glyphosate and demonstrate the value of OCT for aquatic toxicology.
This study aims to evaluate the effects of the herbicide 2,4-D dimethylammonium on the riceland prawn (Macrobrachium lanchesteri), a widely used chemical known to accumulate in aquatic organisms. The investigation employed Optical Coherence Tomography (OCT) to assess morphological changes in the prawns, alongside histological analyses and measurements of enzymatic activities.
This study investigates the effects of a glyphosate-based herbicide on the eggs and embryos of the golden apple snail (Pomacea canaliculata), with particular focus on hatching rate, morphological changes, and the expression of the enzyme acetylcholinesterase (AChE). The golden apple snail is an ecologically and economically significant aquatic species, and exposure to herbicides in aquatic environments may impact snail populations and disrupt aquatic ecosystems.
Since 2015, we have continuously developed a compact OCT microscope prototype tailored for field assessments in aquatic animal study. Specifically, it is used to evaluate pesticide exposure in freshwater fish. The prototype, comprising exclusively commercial optical components, achieves imaging depths up to 2 mm from a sample's surface at a rate of 20 frames per second and boasts resolutions of 10 microns both laterally and in depth. We demonstrated its utility by imaging African catfish exposed to the herbicide 2,4-D dimethylammonium, comparing these with control samples. We performed in vivo 3D imaging, using the developed prototype, on each catfish throughout its hatching and embryonic development period, comparing the 2,4-D exposure with the control. The results show significant deviations in the exposed group from the typical developmental patterns observed in the control group. This confirms the capability of OCT to assess the effects of herbicides on aquatic organisms.
The effective spectral resolution of a spectrometer that utilizes dispersive optics is normally limited by either the size of the sensor pixels or the optical resolution of the focusing optics. Therefore, achieving optimal optical alignment is crucial to maximize the spectrometer's effective spectral resolution. In this paper, we introduce a laboratory method for real-time assessment of spectrometer alignment by measuring the modulation transfer function (MTF). The modulation on spectral signal is generated using an interferometer, allowing control of the modulation frequency by adjusting the optical path difference. The results show that the proposed technique can provide useful information about the alignment of the spectrometer, which can be used to obtain the optimum alignment of the spectrometer. The accuracy of the proposed method was confirmed by comparing the MTF measurement, and hence the resolution evaluation, with the specifications of a commercial spectrometer. In addition, we demonstrate the use case of the proposed method by performing a through-focus MTF measurement on a custom-built spectrometer with known misalignments.
My postdoctoral research at the Institute of Optics, University of Rochester, involves developing new techniques for characterization of layered polymeric GRIN material, such as 3D structural imaging, optical thickness topography, and 3D refractive index measurement. The research is part of the Manufacturable GRIN project supported by DARPA.
The method proposes the following advantages:
Non-destructive visualization of defective sites under neath the sample surface.
Capable of mapping thickness of internal film layers.
Capable of 3D refractive index measurement of the sample.
In this research, We developed a custom built swept-source OCT system, aiming for high speed and high resolution 3D imaging of biological samples, such as African frog tadpole, mouse brain, and human skin.
We developed a simultaneous detection phase-shifting-based full-range FD-OCT system referred to as the Dual Detection FD-OCT (DD-FD-OCT). The proposed technique constructs a complex spectral interference from two signals having quadratic phase relation that is simultaneously obtained by two independent detectors, and therefore removes the complex conjugate ambiguity after the Fourier transformation.
The simultaneous acquisition capability of the technique enables full range imaging without any loss of speed and is intrinsically insensitive to the movement of the sample. The full-range DD-FD-OCT provides a simple yet robust solution for real time full range imaging with FD-OCT.
The method proposes the following advantages:
Capable of high speed acquisition and processing
Insensitive to sample motion
Can be combine with other phase-sensitive FD-OCT techniques, such as Doppler imaging.
Most of full-range techniques for FD-OCT reported to date utilize the phase relation between consecutive axial lines to construct a complex interference signal, and hence may exhibit degradation in either mirror image suppression performance or detectable velocity dynamic range or both when monitoring a moving sample such as flow activity.
In this research, we demonstrated the application of DD-FD-OCT to a phase-resolved Doppler imaging without degradation in either mirror image suppression performance or detectable velocity dynamic range that were observed in other full-range Doppler methods.
In this research, we developed an alternative acquisition scheme along with processing technique for a swept-source based PR-DOCT that effectively extends the Velocity Dynamic Range (VDR) of a given PR-DOCT system. The technique extends the minimum detectable velocity for a given phase stability of the system by varying the time interval between two acquired signals used to calculate the Doppler phase shift while maintaining a high phase stability between them.
An example of the implementation of the technique is demonstrated in a dual VDR DOCT system, where two Doppler maps having different detectable VDRs were simultaneously detected, processed, and displayed in real time. The technique is particularly useful for high speed frequency domain OCT (FD-OCT) where the acquisition time is extremely short and hence the ability to visualize the slow axial flow is often limited.
Gabor-Domain Optical Coherence Microscopy (GD-OCM) utilizes the high speed imaging of FD-OCT, the high lateral resolution of OCM, and the ability of real time refocusing of a custom design dynamic focus objective. GD-OCM acquires multiple cross-sectional images corresponding to a discrete refocusing step along depth enabled by the recently developed dynamic focus probe. By acquiring multiple images that focus differently along depth, a method that efficiently extracts and then fuses together in-focus portions, ultimately in real time, is necessary.
My research involved establishing the mathematical description of the GD-OCM as well as developing the technique of extraction and automatic fusion of in-focus portions of the acquired cross-sectional images for GD-OCM.
The method proposes the following advantages:
Providing high resolution, both laterally and axially, 3D OCT imaging.
Enabling ability of cellular level imaging over a large imaging depth.
Minimize shape distortion caused by defocus of the imaging beam.