Manhattan plots

R code for Manhattan plots. These plots display the results of a SNP-by-SNP GWAS association scan, plotting -log10(p-value) on the Y-axis versus genomic position on the X-axis for each SNP in the GWAS panel.

Adapted from original code by Matt Settles, Bioinformatics Core, Washington State University.


manhattan_v2.R

manhattan_v2_altcolor.R