GWAS code

Files for performing GWAS QC. Please refer to Weale ME (2010), “Quality Control for Genome-Wide Association Studies”, in Genetic Variation: Methods and Protocols, Methods in Molecular Biology, vol. 628, pp.341-372 (Eds. M. R. Barnes and G. Breen). Humana Press.

See other pages under “Software” for further utilities relevant to GWAS analysis, including EIGENSOFTplus, Manhattan plots and Q-Q plots.

MEW_Combining_GWAS_datasets_2010_02_02.doc
Weale_chp19_Quality Control for Genome-Wide Association Studies.pdf
MEW_GWAS_QC_Notes_2011_09_23.doc