New Species

The last decade has seen an unprecedented boom in taxonomic and biogeographical discoveries at levels comparable to those of the mid-18th to late 19th century. Such discoveries include not only small and cryptic species but also large and conspicuous ones such as many large mammals, including primates, elephants, and even a whale to name but a few. This has led some to refer to the present as the ‘New Age’ of discoveries. In the New World, primates comprise one of the most diverse Orders of mammals. A good proportion of this species diversity has been described recently; nearly 1 species per year on the last 20 years. Although part of this increase in species descriptions is the result of greater scrutiny in taxonomic studies and increased use of molecular techniques, the bulk of the discoveries and certainly the most surprising ones have come from an increased number of scientific expeditions to unexplored regions of the world.

Amuna Uakari

Mol. Phyl. Evol. 2022 -

Bald uakaris, genus Cacajao, are Amazonian primates currently classified as one species and four subspecies based on the patterns of pelage coloration. In this study, we test if their current taxonomy is represented by the phylogenetic relationship of the main lineages retrieved from molecular data. We included, for the first time, all bald uakari taxa in a mitochondrial (cytochrome b) and genome-wide (ddRAD) phylogenetic analyses. We also examined the pattern of pelage colouration in specimens from zoological collections. Having determined the number of lineages using Maximum Likelihood and the species tree using coalescent analyses, we test their divergence time using a Bayesian approach. While the cytochrome b analysis only recovered two clades, the ddRAD analysis supported the reciprocal monophyly of five lineages of bald uakaris, with all clades including only individuals with distinct and exclusive diagnostic phenotypic characters. We found that species diversification in Cacajao occurred during the last 300 Kya and may have been influenced by the formation of rivers and flooded forests in western Amazonia. We propose that the four bald uakari subspecies currently recognised can be upgraded to species level and we describe the white uakaris from the basin of the Rio Tarauac´a as a new species.



Plecturocebus grovesi

(Molecular Phylogenetics and Evolution,Volume 132, March 2019, Pages 117-137). The taxonomy of the titi monkeys (Callicebinae) has recently received considerable attention. It is now recognised that this subfamily is composed of three genera with 33 species, seven of them described since 2002. Here, we describe a new species of titi, Plecturocebus, from the municipality of Alta Floresta, Mato Grosso, Brazil. We adopt an integrative taxonomic approach that includes phylogenomic analyses, pelage characters, and locality records. A reduced representation genome-wide approach was employed to assess phylogenetic relationships among species of the eastern Amazonian clade of the Plecturocebus moloch group. Using existing records, we calculated the Extent of Occurrence (EOO) of the new species and estimated future habitat loss for the region based on predictive models. We then evaluated the species' conservation status using the IUCN Red list categories and criteria. The new species presents a unique combination of morphological characters: 1) grey agouti colouration on the crown and dorsal parts; 2) entirely bright red-brown venter; 3) an almost entirely black tail with a pale tip; and 4) light yellow colouration of the hair on the cheeks contrasting with bright red-brown hair on the sides of the face. Our phylogenetic reconstructions based on maximum-likelihood and Bayesian methods revealed well-supported species relationships, with the Alta Floresta taxon as sister to P. moloch+P. vieirai. The species EOO is 10,166,653 ha and we predict a total habitat loss of 86% of its original forest habitat under a "business as usual" scenario in the next 24 years, making the newly discovered titi monkey a Critically Endangered species under the IUCN A3c criterion. We give the new titi monkey a specific epithet based on: 1) clear monophyly of this lineage revealed by robust genomic and mitochondrial data; 2) distinct and diagnosable pelage morphology; and 3) a well-defined geographical distribution with clear separation from other closely related taxa. Urgent conservation measures are needed to safeguard the future of this newly discovered and already critically endangered primate.

Cacajao ayresi and Cacajao hosomi


(Int J Primatol (2008) 29:723–741, ilustrations by S. Nash and J. Dungel). The author of the last published systematic review of Cacajao recognized 2 subspecies of black-headed uakaris (black uakaris): Cacajao melanocephalus melanocephalus and C. m. ouakary. As a result of a series of black uakari surveys and collecting expeditions to several tributaries of the Rio Negro and of morphological and molecular analyses of museum specimens and specimens we collected during field expeditions, we reassess their taxonomy. We describe a newly discovered species of black uakari from the Rio Aracá, a left bank tributary of the Rio Negro, Amazonas, Brazil. We also show that ouakary is a junior synonym of melanocephalus and provide a new name and a new description for Cacajao melanocephalus melanocephalus in the Pico da Neblina region of Brazil and Venezuela. Based on genetic, morphological, and ecological evidence, we propose that there are 3 species of black uakaris. We named the Rio Aracá species Cacajao ayresi sp. nov. (Ayres uakari) in honor of the late José Márcio Ayres, a pioneer in uakari research and conservation. We named the Neblina black uakari Cacajao hosomi, after the Yanomami word for uakaris. The new taxonomic arrangement provided here implies that the conservation status of black uakaris needs to be reassessed.

Chiropotes israelita

(Neotropical Primates 10(1), April 2002, photo by Anselmo Fonseca). During a long-term field study of the black-headed uacari monkey, Cacajao melanocephalus melanocephalus, I obtained strong evidence of bearded sakis (Chiropotes sp.) occurring in my study area in the Pico da Neblina National Park, Amazonas (Boubli, 1997, 1999). I first became aware of the possibility of bearded sakis there in 1991 when I noticed Yanomamis (the people that inhabit the park) from Maturacá (a large Yanomami settlement and Salesian Mission inside Pico da Neblina National Park, Fig. 2) wearing decorative headpieces made from their tails. Inquiring about the origins of the headpieces, I was told that bearded sakis could be found throughout the national park. They were, however, also reported to be rare in most areas of the park, although relatively more abundant to the east of the Rio Marauiá, which marks the eastern limit of Pico da Neblina National Park (Fig. 1). The Yanomamis I interviewed said that although bearded sakis could be seen in monospecific groups, they were more often found in mixed-species aggregations with black-headed uacaris. The presence of bearded sakis in the Pico da Neblina National Park was confirmed on 23 May 1995, when my two field assistants (locals from São Gabriel da Cachoeira, Fig. 2) observed a single female carrying an infant within my study site. Following a suggestion by Yanomamis from the lower Rio Marauiá, on my most recent survey, I took up my search again for bearded sakis around a small settlement known as “Sítio do José Maria”, on the left bank of the lower Rio Marauiá .

Mico munduruku

(PeerJ 7:e7019, July 2019, illustration by S. nash) Although the Atlantic Forest marmosets (Callithrix spp.) are among the best studied Neotropical primates, the Amazonian marmosets (Callibella humilis, Cebuella spp. and Mico spp.) are much less well-known. Even species diversity and distributions are yet to be properly determined because field data and materials currently available in scientific collections do not allow comprehensive taxonomic studies of Amazonian marmosets. From 2015 to 2018, we conducted 10 expeditions in key-areas within southern Amazonia where little or no information on marmosets was available. In one such region-the Tapajós-Jamanxim interfluve-we recorded marmosets with a distinctive pelage pigmentation pattern suggesting they could represent a new species. We tested this hypothesis using an integrative taxonomic framework that included phylogenomic data (ddRAD sequences), pelage pigmentation characters, and distribution records. We found that the marmosets of the northern Tapajós-Jamanxim interfluve have unique states in pelage pigmentation characters, form a clade (100% support) in our Bayesian and Maximum-Likelihood phylogenies, and occur in an area isolated from other taxa by rivers. The integration of these lines of evidence leads us to describe a new marmoset species in the genus Mico, named after the Munduruku Amerindians of the Tapajós-Jamanxim interfluve, southwest of Pará State, Brazil.

Cebuella pygmaea

(Mol Phyl Evol, Volume 120, March 2018, Pages 170-182). The pygmy marmoset, Cebuella pygmaea, the smallest of the New World monkeys, has one of the largest geographical distributions of the Amazonian primates. Two forms have been recognized: Cebuella pygmaea pygmaea (Spix, 1823), and C. p. niveiventris Lönnberg, 1940. In this study, we investigated if the separation of pygmy marmosets into these two clades can be corroborated by molecular data. We also examine and compare coloration of the pelage in light of the new molecular results. We analyzed the mtDNA cytochrome b gene and, for the first time for any Neotropical primate, we used a reduced representation genome sequencing approach (ddRADseq) to obtain data for recently collected, geographically representative samples from the Rio Japurá, a northern tributary of the Rio Solimões and from the Javarí, Jutaí, Juruá, Madeira and Purus river basins, all tributaries south of the Solimões. We estimated phylogenies and diversification times under both maximum likelihood and Bayesian inference criteria. Our analysis showed two highly supported clades, with intraclade divergences much smaller than interclade divergences, indicating two species of Cebuella: one from the Rio Japurá and one to the south of Solimões. The interpretation of our results in light of the current taxonomy is not trivial however. Lönnberg stated that the type of Spix’s pygmy marmoset (type locality ‘near Tabatinga’) was obtained from the south of the Solimões, and his description of the distinct niveiventris from Lago Ipixuna, south of the Solimões and several hundred kilometres east of Tabatinga, was based on a comparison with specimens that he determined as typical pygmaea that were from the upper Rio Juruá (south of the Solimões). As such it remains uncertain whether the name pygmaea should be applicable to the pygmy marmosets north of the Rio Solimões (Tabatinga type locality) or south (near Tabatinga but across the Solimões). Finally, our analysis of pelage coloration revealed three phenotypic forms: (1) south of the Rio Solimoes, (2) Eirunepé-Acre, upper Juruá basin; and (3) Japurá. More samples from both sides of Solimões in the region of Tabatinga will be necessary to ascertain the exact type locality for Spix’s pygmaea and to resolve the current uncertainties surrounding pygmy marmoset taxonomy.