Publications
At WUSTL (2015 onwards): Underlined bold articles are from the Bose lab with Arpita as corresponding author
(Arpita's ORCID) (h Index 2023- 22, i10 - 27)
(2023 - )
Bose A (2023). Global warming and freshwater microbiology, A Child-Centric Microbiology Education Framework. Applied Microbiology International's Microbiology literacy knowledge framework (Editor Kenneth Timmis, The Royal Society).
Zainab N, Glick BR, Bose A, Ali JA, Rehman FU, Paker NP, Rengasamy K, Kamran MA, Hayat K, Munis MF, Sultan T, Imran M, Chaudhary HJ (2024). Deciphering the mechanistic role of Bacillus paramycoides (PM51) and Bacillus tequilensis (PM52) in bio-sorption and phyto-assimilation of Cadmium via Linum usitatissimum L. Seedlings. Plant Physiology and Biochemistry (Accepted)
Stoica A, Meacham JM, Blodgett JAV, Bose A. Microfluidic Microbial Bioreactors: How studying microbes at the microscale can empower microbiology. Open Access Government, January 2024, ISSN 2516-3817, pg 216. https://doi.org/10.56367/OAG-041-10994
Prabhakar P, Rajkumar A, Vu T, Bose A. Purple non-sulfur bacteria and the circular economy. Open Access Government, January 2024, ISSN 2516-3817, pg 214.https://doi.org/10.56367/OAG-041-10018
Morrison H, Bose A (2023). Harnessing redox power for biotechnological applications in purple non sulfur bacteria. Open Access Government, October 2023, ISSN 2516-3817, pg 248. https://doi.org/10.56367/OAG-040-10994
Conners EM, Bose A (2023). Phototrophs, electricity, and the circular economy. PurpleGain EU-COST Action First Workshop Zenodo paper collection. DOI: 10.5281/zenodo.10079953
Vu T, Bose A (2023). How to convert CO2 to bioplastics in the age of global warming. Open Access Government Profile Feature Article. July 2023. https://doi.org/10.56367/OAG-039-10018
Conners EM, Karthikeyan R, Bose A (2023).The phototrophic bacteria Rhodomicrobium spp. are novel chassis for bioplastic production. bioRxiv. In revision
Ranaivoarisoa TO, Bai W, Karthikeyan R, Silberman M, Olabode J, Steele H, Bose A (2023). Improving bioplastic production by Rhodopseudomonas palustris TIE-1 using synthetic biology and metabolic engineering. bioRxiv. Under Review
Silberman M, Chao C, Bose A (2023). Closing the Carbon Cycle with Bacteria - Petroleum Alternatives (Open Access Government - Special Report)
Silberman M, Chao C, Bose A (2023). Bioplastics and back: bacterial construction and degradation methods (eBook) Open Access Government, April 2023, ISSN 2516-3817, pg 523.
(2022)
Stoica A, Meacham JM, Bose A (2022). Microbes on a chip: how microfluidics can help us better understand and engineer electroactive microbes (Open Access Government - Profile Feature Article). Open Access Government, January 2023, ISSN 2516-3817, pgs 258-259. https://doi.org/10.56367/OAG-037-10018
Yang A, Ranaivoarisoa TO, Bose A (2022). Pyruvate dehydrogenase mutant of Saccharomyces cerevisiae displays improved ethanol tolerance and production in anaerobic and high glucose media. International Journal of High-School Research, 2023 Vol. 5 Issue 5 p. 138-144. https://doi.org/10.36838/v5i5.25. Preprint.
Prabhakar P, Rajkumar A, Bose A (2022). Synthetic biology and microbial electrosynthesis (Open Access Government - Special Report)
Conners EM, Davenport EJ, Gallagher B, Bose A (2022). Electron transfer processes between microbes and electrodes in bioelectrochemical reactors (Book Chapter in MATERIAL-MICROBES INTERACTIONS: ENVIRONMENTAL BIOTECHNOLOGICAL PERSPECTIVE, Editors Deepak Pant et al). (Accepted)
GENETICALLY ENGINEERED RHODOPSEUDOMONAS PALUSTRIS. U.S. Patent Application Serial No. 18/046,695. Arpita Bose
Gallagher B, Bose A (2022). The role of microbial diversity in microbial electrosynthesis. (Open Access Government - eBook)
Karthikeyan R, Conners EM, Ranaivoarisoa TO, Bose A (2022). Improving microbial electrosynthesis with novel cathode modifications. (Open Access Government - Special Report)
Davenport EJ, Bose A (2022). A piece of the puzzle into climate research: freshwater wetlands microbes. (Open Access Government - Profile Feature Article) Open Access Government, July 2022, ISSN 2516-3817, pgs 258-259.
Davenport EJ, Bose A (2022). Could soil microbes be a solution to the climate crisis? (Open Access Government - Special Report)
Davenport EJ, Bose A (2022). Taxonomic re-evaluation and genomic comparison of novel extracellular electron uptake-capable Rhodovulum visakhapatnamense and Rhodovulum sulfidophilum isolates. (Accepted -Microorganisms, Special Issue - Phototrophic Bacteria, Editors Bob Blankenship, Matthew Sattley) Preprint. Microorganisms 2022, 10(6), 1235; https://doi.org/10.3390/microorganisms10061235
Conners EM, Prabhakar P, Bose A (2022). Decarbonization with microbial electrosynthesis: recent progress and future perspectives (Open Access Government - eBook) Open Access Government, April 2022, ISSN 2516-3817, pgs 240-241.
Conners EM, Karthikeyan R, Bose A (2022). Electroactive biofilms: how microbial electron transfer enables bioelectrochemical applications. (Accepted - Journal of Industrial Microbiology and Biotechnology) Editor's Choice and Most Cited.
(2021)
Conners EM, Bose A. Microbial Electrosynthesis for Sustainable Bioproduction (2021). (Open Access Government - Profile Feature - Accepted). Open Access Government, January 2022, ISSN 2516-3817, pgs 230-231.
Bose A, Bai W, Ranaivoarisoa TO, Karthikeyan R, Singh R (2021). Harnessing Microbes to Produce Sustainable Plastics and Biofuels. Scientia.Global, eBook. https://doi.org/10.33548/SCIENTIA730
Genetically engineered Rhodopseudomonas palustris. Docket No.: 019598/US (and T-019286) Arpita Bose
Bai W, Ranaivoarisoa TO, Karthikeyan R, Singh R, Bose A (2020/2021). Sustainable production of a biofuel by Rhodopseudomonas palustris TIE-1. Communications Biology (Accepted) Featured by the Source, the Debrief, Green Car Congress, Engineering & Technology, AZO materials, Department of Energy Office of Science, SINC, Brinkwire, National Science Foundation, Voice of America, and others!
Gupta D*, Guzman MS*, Rengasamy K*, Stoica A, Singh R, Ranaivoarisoa TO, Davenport EJ, Bai W, McGinley B, Meacham JM, Bose A (2021) Photoferrotrophy and phototrophic extracellular electron uptake is common in marine anoxygenic phototrophs (Accepted to ISME J). *Equal Contribution. Featured by National Public Radio once and then again on the Steve Kresge show, Scientific American, Voice of America, Weather Network and Missouri Columbian.
Conners EM*, Davenport EJ*, Bose A (2021). Revised draft genome sequences of Rhodomicrobium vannielii ATCC 17100 and Rhodomicrobium udaipurense JA643 (Accepted - Microbial Resource Announcement). *Equal Contribution
Dubbin K, Dong Z, Park D, Alvarado J, Su J, Wasson E, Robertson C, Jackson J, Bose A, Moya M, Jiao Y, Hynes W (2021) Projection Micro-stereolithographic Microbial Bioprinting for Engineered Biofilms (Accepted -Nano Letters)
(2018 - 2020)
Singh R, Bose A (2020) Understanding the role of phototrophic extracellular electron uptake in terrestrial carbon cycling at the systems level. American Geophysical Union Fall Meeting 2020.
Micro-bioelectrochemical cell devices and methods of detecting electron flows. J Meacham, A Bose (2020) US Patent App. 16/776,496
Karthikeyan R, Ranaivoarisoa TO, Bai W, Bose A (2020). Magnetite nanoparticle anchored graphene cathode enhances microbial electrosynthesis of polyhydroxybutyrate by Rhodopseudomonas palustris TIE-1 (Accepted to Nanotechnology: Focus Issue on Extracellular Electron Conduits).
Gupta D, Guzman MS, Bose A (2020). Extracellular Electron Uptake by Autotrophic Microbes: Physiological, Ecological, and Evolutionary Implications. Accepted to the Special Issue of Journal of Industrial Microbiology and Biotechnology. Cover Image
Singh R, Ranaivoarisoa TO, Gupta D, Bai W, Bose A (2020). Genetic redundancy in iron and manganese transport in the metabolically versatile bacterium, Rhodopseudomonas palustris TIE-1. bioRxiv. (Accepted to Applied and Environmental Microbiology) Editors Spotlight.
Fike D, Bradley A, Pakrasi H, Bose A (2020). Final Report: Development of a novel high-precision, high-resolution SIMS platform for elemental and isotopic characterization of microbial cells. DOI: 10.2172/1582409
Society for Industrial Microbiology and Biotechnology General Meeting 2019 funded by Department of Energy, Women in Environmental Science.
Gupta D, Sutherland M, Karthikeyan R, Meacham JM, Kranz RG, Bose A (2019). Photoferrotrophs produce a PioAB electron conduit for extracellular electron uptake (Accepted to mBio). Featured in the Source, EurekAlert and many other news sources.
Genome engineering for material synthesis, Workshop Report, US Department of Energy, Office of Science (June 2019).
Karthikeyan R, Singh R, Bose A (2018). Microbial Electron Uptake for Microbial Electrosynthesis. (Journal of Industrial Microbiology and Biotechnology; Special Issue – Frontiers of Industrial Microbiology and Biotechnology) (Read only access). Featured by WUSTL!
Ranaivoarisoa T, Singh R, Karthikeyan R, Guzman MS, Bose A (2018). Towards sustainable bioplastic production using Rhodopseudomonas palustris TIE-1. (Journal of Industrial Microbiology and Biotechnology; Special Issue – Frontiers of Industrial Microbiology and Biotechnology) (Open access). Featured by WUSTL and many other news sources.
Guzman MS, Karthikeyan R, Binkley M, Jones C, Ranaivoarisoa TO, Singh R, Fike DA, Meacham JM, Bose A (2018). Phototrophic extracellular electron transfer is linked to carbon dioxide fixation in the bacterium Rhodopseudomonas palustris. Nature Communications 10, Article number:1355. Open access. Featured in Nature Microbiology Research Communities Behind the Paper. Featured by WUSTL and many other news sources!
Rowe A, Xu S, Gardel E, Bose A, Girguis P, Amend J, & El-Naggar M (2018). Methane-linked mechanisms of electron uptake from cathodes by Methanosarcina barkeri. bioRxiv, 415653. mBio (In press and open access)
Gupta D, Guzman MS, Bose A (2018). Draft Genome Sequence of a Marine Photoferrotrophic Bacterium, Rhodovulum robiginosum DSM 12329T Microbial Resource Announcements (In press and open access)
Guzman MS, Bose A (2018). Draft Genome Sequences of Four Rhodobacter sphaeroides Strains. Microbial Resource Announcements (In press and open access)
Guzman MS, Kuse JC, Santiago-Merced N, Bose A (2018). Draft Genome Sequences of two Marichromatium Strains. Microbial Resource Announcements (In press and open access)
Karthikeyan R, Singh R, Ranaivoarisoa T, Bose A (2018). An Insoluble Iron Complex Coated Cathode Enhances Direct Electron Uptake by Rhodopseudomonas palustris TIE-1. Bioelectrochemistry (Volume 122, August2018, Pages 164-173, Green open access). Featured in Science Trends.
(2015-2017)
Karthikeyan R, Singh R, Ranaivoarisoa T, Bose A (2017). Improving microbial electrosynthesis of polyhydroxybutyrate (PHB) from CO2 by Rhodopseudomonas palustris TIE-1 using an immobilized iron complex modified cathode. bioRxiv (Now published in Bioelectrochemistry doi:10.1016/j.bioelechem.2018.03.015, Green open access)
Ranaivoarisoa T, Karthikeyan R, Guzman MS, Singh R, Bose A (2017). Towards sustainable bioplastic production in resource limited environments using the photoferroautotrophic and photoelectroautotrophic bacterium Rhodopseudomonas palustris TIE-1. bioRXiv (Now published in the Journal of Industrial Microbiology and Biotechnology; Special Issue – Frontiers of Industrial Microbiology and Biotechnology; Open access)
Singh R, Guzman MS, Bose A (2017). Anaerobic oxidation of ethane, propane and butane by marine microbes: A mini review. Frontiers in Microbiology (Frontiers in Microbiology, https://doi.org/10.3389/fmicb.2017.02056, Open access)
Karthikeyan R, Selvam A, Cheng KY, Bose A, Wong JWC (2017). Bioelectrohydrogenesis and inhibition of methanogenic activity in microbial electrolysis cells- A review. Biotechnology Advances. Volume 35, Issue 6, 1 November 2017, Pages 758-771. (Access at WU Open Scholarship)
Guzman MS, McGinley B, Santiago-Merced N, Gupta D, Bose A (2016). Draft genome sequences of three closely related isolates of the purple nonsulfur bacterium Rhodovulum sulfidophilum. Genome Announcements. 5.11 (e00029-17). Open access.
Before WUSTL:
Harvard –
Bose A, Gardel EJ, Vidoudez C, Parra EA, Girguis PR (2014). Electron uptake by iron oxidizing phototrophic bacteria. Nature Communications. 5, Article number:3391. Featured in Science Daily, EurekAlert and various news articles & blogs. Open access.
Bose A, Rogers DR, Adams MM, Joye SB, Girguis PR (2013). Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments. Frontiers in Microbiology 4:386. Featured in The Gulf of Mexico Research Initiative, and ECOGIG. Open access.
Adams, MM, Hoarfrost AL, Bose A, Joye SB, Girguis PR (2013). Anaerobic oxidation of short-chain alkanes in hydrothermal sediment: influences on sulfur cycling and microbial diversity. Frontiers in Microbiology 4:110. Open access.
Massachusetts Institute of Technology -
Bose A, Newman, DK. (2011) Regulation of the phototrophic iron oxidation (pio) genes in Rhodopseudomonas palustris TIE-1 is mediated by the global regulator, FixK. Molecular Microbiology 79(1):63-75. Open access.
Bose A, Kopf S, Newman, DK. (2010) From geocycles to genomes and back. In Stolz JF and Oremland, RS (ed.), Microbial metal and metalloid metabolism. ASM press, Washington, D.C. Featured in Microbe (2012) 7(5):246-247. Available at ASM Press.
University of Illinois at Urbana -
Bose A, Kulkarni G, Metcalf WW. (2009) Regulation of putative methyl-sulfide methyltransferases in Methanosarcina acetivorans C2A. Molecular Microbiology 74(1):227-38. Open access.
Opulencia RO, Bose A, Metcalf WW. (2009) Physiology and post-transcriptional regulation of methanol:coenzyme M methyltransferase isozymes in Methanosarcina acetivorans C2A. Journal of Bacteriology 191(22):6928-35. Open access.
Bose A. Genetic and biochemical analysis of methyltransferase gene regulation in Methanosarcina acetivorans C2A. PhD Thesis,University of Illinois at Urbana-Champaign. Available at Proquest LLC.
Bose A, Pritchett MA, Metcalf WW (2008) Genetic analysis of the methanol specific methyltransferase 2 genes of Methanosarcina acetivorans C2A. Journal of Bacteriology 190(11):4017-26. Open access.
Bose A, Metcalf WW (2008). Distinct regulators control the expression of methanol methyltransferase isozymes in Methanosarcina acetivorans C2A. Molecular Microbiology 67(3):649–61. Open access.
Bose A, Pritchett MA, Rother M, Metcalf WW.(2006) Differential regulation of the three methanol methyltransferase isozymes in Methanosarcina acetivorans C2A. Journal of Bacteriology 88(20):7274-83. Open access.
Rother M, Boccazzi P, Bose A, Pritchett MA, Metcalf WW.(2005) Methanol-dependent gene expression demonstrates that methyl-coenzyme M reductase is essential in Methanosarcina acetivorans C2A and allows isolation of mutants with defects in regulation of the methanol utilization pathway. Journal of Bacteriology 187(16):5552-59. Open access.
All India Institute of Medical Sciences-
Bose A, Sharma D, Shakila H, Das TK, Tyagi JS, Ramanathan VD. (2006) Expression of mycobacterial cell division protein, FtsZ, and dormancy proteins, DevR and Acr, within lung granulomas throughout guinea pig infection. FEMS Immunology and Medical Microbiology 48(3):329-36. Open access.