Assemble RTK Base and rover and set base location - this will be the reference place for the rover.
Set up ground control points (targets) throughout the area you want to cover
Georeference these points using the RTK rover.
These points can now be used to accurately georeference your data in the processing stage, or repeat the project if necessary.
For a more in-depth explanation of using the RTK for georeferencing, check out The EMLID Youtube Account
For a step by step video on setting up the RTK base, check out this video: