Citation

Please cite the following paper when using Rnnotator for publication:

Jeffrey Martin, Vincent M Bruno, Zhide Fang, Xiandong Meng, Matthew Blow, Tao Zhang, Gavin Sherlock, Michael Snyder and Zhong Wang.

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads.

BMC Genomics (2010) 11:663

Also, see the related review article:

Jeffrey A. Martin & Zhong Wang

Next-generation transcriptome assembly

Nature Reviews Genetics (2011) 12:671-682