Publications (# Equal contributions):
2023
Hou,Z.; Nightingale,F.; Zhu,Y.; MacGregor-Chatwin,C.; Zhang,P.*; Structure of native chromatin fibres revealed by Cryo-ET in situ. Nature Communications, 2023, 14:6324 link
Ni,T.; Jiang,Q.; Ng,C.P.; Shen,J.; Dou,H.; Zhu,Y.; Radecke,J.; Dykes,F.G; Huang,F.; Liu,L.-N.*; Zhang, P.*; Intrinsically disordered CsoS2 acts as a general molecular thread for α-carboxysome shell assembly. Nature Communications, 2023, 14:5512 link
Ni,T.#; Mendonca,L.#; Zhu,Y.#; Howe, A.; Radecke,J.; Shah,P.; Sheng,Y.; Krebs,A.-S.; Duyvesteyn,H.; Allen,E.; Lambe,T.; Bisset,C.; Spencer,A.; Morris,S.; Stuart,I.D.; Gilbert,S.; Zhang,P.*; ChAdOx1 COVID vaccines express RBD open prefusion SARS-CoV-2 spikes on the cell surface. iScience, 2023, 26, 107882 link
Lee,D.#; Zhu,Y.#; Colson,L.#; Wang,X.; Chen,S.; Tkacik,E.; Huang,L; Ouyang,Q.; Goldberg,L.A.*; Lu,Y.*; Molecular mechanism for activation of the 26S proteasome by ZFAND5. Molecular Cell, 2023, 83, 2959-2975 link
Lu,Y.; Lee,D.; Zhu,Y.; Meet the authors: Ying Lu, Donghoon Lee, and Yanan Zhu. Molecular Cell, 2023, 83, 2829-2831 link
Waheed,A.A.*; Zhu,Y.; Agostino,E.; Naing,L.; Hikichi,Y.; Soheilian,F.; Yoo,S.; Song,Y.; Zhang,P.; Slusher,S.B.; Haughey,J.N.; Freed,O.E.*; Neutral sphingomyelinase 2 is required for HIV-1 maturation. Proc. Natl. Acad. Sci. USA, 2023, 120(28):e2219475120 link
Kleinpeter,B.A.; Zhu,Y.; Mallery,L.D.; Ablan,D.S.; Chen,L.; Hardenbrook,N.; Saiardi,A.; James,C.L.; Zhang,P.; Freed,O.E.*; The effect of inositol hexakisphosphate on HIV-1 particle production and infectivity can be modulated by mutations that affect the stability of immature gag lattice. Journal of Molecular Biology, 2023, 1:168037 link
2022
Ni,T.; Sun,Y.; Seaton-Burn,W.; Al-Hazeem,M.J.M.; Zhu,Y.; Yu,X.; Liu,L.-N.*; Zhang,P.*; Structure and assembly of cargo Rubisco in two native α-Carboxysomes. Nature Communications, 2022, 13:4299 link
Zhu,Y.#; Koo,W.C.#; Cassidy,K.C.; Spink,C.M.; Ni,T.; Zanetti-Domingues, C.L.; Bateman,B.; Martin-Fernandez,L.M.; Shen,J.; Sheng,Y.; Song,Y.; Yang,Z.; Rosenzweig,C.A.*; Zhang,P.*; Structure and activity of particulate methane monooxygenase arrays in methanotrophs. Nature Communications, 2022, 13:5221 link
2021
Ni,T.#; Zhu,Y.#; Yang,Z.#; Xu,C.; Chaban,Y.; Nesterova,T.; Ning,J.; Böcking,T; Parker,W.M.; Monnie,C.; Ahn,J; Perilla,R.J.; Zhang, P*; Structure of Native HIV-1 cores and their Interactions with IP6 and CypA. Science Advances, 2021, 7, eabj5715 link
Zhu,Y.#; Sun,D.#; Schertel,A.; Ning,J.; Fu,X.; Gwo,P.P.; Watson,M.A.; Zanetti-Domingues, C.L.; Martin-Fernandez, L.M.; Freyberg, Z.; Zhang, P*; Serial cryoFIB/SEM reveals cytoarchitectural disruptions in Leigh Syndrome patient cells. Structure, 2021, 29(1), 82-87 link
2020
Liu,C.; Mendonca,L.; Yang,Y.; Gao,Y.; Shen,C.; Liu,J.; Ni,T.; Ju,B.; Liu, C.; Tang, X.; Wei, J.; Ma, X.; Zhu, Y.,; Liu, W.; Xu, S.; Liu, Y.; Yuan, J.; Wu, J.; Liu, Z.; Zhang, Z.; Liu, L.*; Wang, P.*; Zhang, P.*; The architecture of inactivated SARS-CoV-2 with postfusion spikes revealed by Cryo-EM and Cryo-ET, Structure, 2020, 28(11), 1218-1224 link
Zhang,X.; Yu,D.; Sun,J.; Wu,Y.; Gong,J.; Li,X.; Liu,L.; Liu,S.; Liu,J.; Wu, Y.; Li, D.; Ma, Y.; Han, X.; Zhu, Y.; Wu, Z.; Wang, Y.; Ouyang, Q.; Wang, T.*; Visualization of ligand-bound ectodomain assembly in the full-length human IGF-1 receptor by Cryo-EM single-particle analysis, Structure, 2020, 28(5), 555-561 link
2019
Dong,Y.; Zhang,S.; Wu,Z.; Li,X.; Wang,W.L.; Zhu,Y.; Stoilova,S.; Lu, Y.; Finley, D.; Mao, Y*; Cryo-EM structures and dynamics of substrate-engaged human 26S proteasome, Nature, 2019, 565(7737), 49-55 link
2018
Zhu,Y.#; Wang,W.L.#; Yu,D.; Ouyang,Q; Lu,Y.*; Mao,Y*; Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldnase in the activated human 26S proteasome, Nature Communications, 2018, 9(1), 1360 link
2017
Zhu,Y.; Ouyang,Q.; Mao,Y*; A deep convolutional neural network approach to single-particle recognition in cryo-electron microscopy, BMC Bioinformatics, 2017, 18(1), 348 link
Zhu,Y; Zhang,S; Mao,Y*; Cryo-electron microscopy revolutionizes molecular biophysics, Physics, 2017, 46(2):76-83. link