Katagiri, S., Kamiyama, Y., Yamashita, K., Iizumi, S., Suzuki, R., Aoi, Y., Takahashi, F., Kasahara, H., Kinoshita, T., Umezawa, T. Accumulation of Phosphorylated SnRK2-Substrate 1 Promotes Drought Escape in Arabidopsis. Plant Cell Physiol. 2023 Nov 16:pcad146. doi:10.1093/pcp/pcad146.

大谷晴香, 井上和奏, 高橋史憲. 浸透圧ストレス応答に関わる分泌性ペプチド群の機能解析. アグリバイオ 2023年12月号, pp.70-73.

Ohnuma, M., Ito, K., Hamada, K., Takeuchi, A., Asano, K., Noda, T., Watanabe, A., Hokura, A., Teramura, H., Takahashi, F., Mutsuro-Aoki, H., Tamura, K., Shimada, H. Peculiar properties of tuber starch in a poteto mutant lacking the a-glucan water dilinase 1 gene GWD1 created by targeted mutagenesis using the CRISPR/dMac3-Cas9 system. Plant Biotechnology. 2023;40:219-227.

大谷晴香, 井上和奏, 高橋史憲. 分泌性ペプチド群によるストレス情報伝達の解明. アグリバイオ 2023年7月号, pp.39-43.

Soma, F., Takahashi, F., Kidokoro, S., Kameoka, H., Suzuki, T., Uga, Y., Shinozaki, K., Yamaguchi-Shinozaki, K. Constitutively active B2 Raf-like kinases are required for drought-responsive gene expression upstream of ABA-activated SnRK2 kinases. Proc Natl Acad Sci U S A. 2023 Jun 13;120(24):e2221863120. doi: 10.1073/pnas.2221863120. Epub 2023 Jun 5.

2022

Xu, Q., Schmidt, W., Aalen, R.B., Takahashi, F*. Peptide signaling in plants.  Front Plant Sci. 2022;13:843918. doi: 10.3389/fpls.2022.843918. eCollection 2022. 

Soma, F., Takahashi, F., Shinozaki, K., Yamaguchi-Shinozaki, K. Affinity purification followed by liquid chromatography-tandem mass spectrometry to identify proteins interacting with ABA signaling components. Methods Mol Biol. 2022;2462:181-189. doi: 10.1007/978-1-0716-2156-1_14. 

Takahashi, F*. Use of micrografting to study the role played by peptide signals in ABA biosynthesis. Methods Mol Biol. 2022;2462:101-109. doi: 10.1007/978-1-0716-2156-1_8. 

Kim, J.S., Sakamoto, Y., Takahashi, F., Shibata, M., Urano, K., Matsunaga, S., Yamaguchi-Shinozaki, K., Shinozaki, K. Arabidopsis TBP-ASSOCIATED FACTOR 12 ortholog NOBIRO6 controls root elongation with unfolded protein response cofactor activity. Proc Natl Acad Sci U S A. 2022 Feb 8;119(6):e2120219119. doi: 10.1073/pnas.2120219119. 

Kuromori, T., Fujita, M., Takahashi, F., Yamaguchi-Shinozaki, K., Shinozaki, K. Inter-tissue and inter-organ signaling in drought stress response and phenotyping of drought tolerance. Plant J. 2022 Jan;109(2):342-358. doi: 10.1111/tpj.15619. Epub 2021 Dec 16. 

2021

Kamiyama, Y., Hirotani, M., Ishikawa, S., Minegishi, F., Katagiri, S., Rogan, C.J., Takahashi, F., Nomoto, M., Ishikawa, K., Kodama, Y., Tada, Y., Takezawa, D., Anderson, J.C., Peck, S.C., Shinozaki, K., Umezawa, T. Arabidopsis group C Raf-like protein kinases negatively regulate abscisic acid signaling and are direct substrates of SnRK2. Proc Natl Acad Sci U S A. 2021 Jul 27;118(30):e2100073118. doi: 10.1073/pnas.2100073118. 

Bolortuya, B., Kawabata, S., Yamagami, A., Davaapurev, BO., Takahashi, F., Inoue, K., Kanatani, A., Mochida, K., Kumazawa, M., Ifuku, K., Jigjidsuren, S., Battogtokh, T., Udval, G., Shinozaki, K., Asami, T., Batkhuu, J., Nakano, T. Transcriptome analysis of Chloris virgata, which shows the fastest germination and growth in the major mongolian grassland plant. Front Plant Sci. 2021 Jun 28;12:684987. doi: 10.3389/fpls.2021.684987. eCollection 2021. 

Soma, F., Takahashi, F*., Yamaguchi-Shinozaki, K., Shinozaki, K. Cellular phosphorylation signaling and gene expression in drought stress responses: ABA-dependent and ABA-independent regulatory systems. Plants (Basel). 2021 Apr 13;10(4):756. doi: 10.3390/plants10040756.

Yoshida, T., Fernie, A.R., Shinozaki, K., Takahashi, F*. Long-distance stress and developmental signals associated with abscisic acid signaling in environmental responses. Plant J. 2021 Jan;105(2):477-488. doi: 10.1111/tpj.15101. Epub 2020 Dec 19.

2020

Kamal, M.M., Ishikawa, S., Takahashi, F., Suzuki, K., Kamo, M., Umezawa, T., Shinozaki, K., Kawamura, Y., Uemura, M. Large-scale phosphoproteomic study of Arabidopsis membrane proteins reveals early signaling events in response to cold. Int J Mol Sci. 2020 Nov 16;21(22):8631. doi: 10.3390/ijms21228631.

Takahashi, F*., Kuromori, T., Urano, K., Yamaguchi-Shinozaki, K., Shinozaki, K. Drought stress responses and resistance in plants: From cellular responses to long-distance intercellular communication. Front Plant Sci. 2020 Sep 10;11:556972. doi: 10.3389/fpls.2020.556972. eCollection 2020.

Takagi, M., Iwamoto, N., Kubo, Y., Morimoto, T., Takagi, H., Takahashi, F., Nishiuchi, T., Tanaka, K., Taji, T., Kaminaka, H., Shinozaki, K., Akimitsu, K., Terauchi, R., Shirasu, K., Ichimura, K. Arabidopsis SMN2/HEN2, encoding DEAD-box RNA helicase, governs proper expression of the resistance gene SMN1/RPS6 and is involved in dwarf, autoimmune phenotypes of mekk1 and mpk4 mutants. Plant Cell Physiol. 2020 Aug 1;61(8):1507-1516. doi: 10.1093/pcp/pcaa071.

Soma, F., Takahashi, F., Suzuki, T., Shinozaki, K., Yamaguchi-Shinozaki, K. Plant Raf-like kinases regulate the mRNA population upstream of ABA-unresponsive SnRK2 kinases under drought stress. Nat Commun. 2020 Mar 13;11(1):1373. doi: 10.1038/s41467-020-15239-3.

2019

Ishikawa, S., Barrero, J.M., Takahashi, F., Nakagami, H., Peck, S.C., Gubler, F., Shinozaki, K., Umezawa, T. Comparative phosphoproteomic analysis reveals a decay of ABA signaling in barley embryos during after-ripening. Plant Cell Physiol. 2019 Dec 1;60(12):2758-2768. doi: 10.1093/pcp/pcz163.

Takahashi, F*., Hanada, K., Kondo, T., Shinozaki, K. Hormone-like peptides and small coding genes in plant stress signaling and development. Curr Opin Plant Biol. 2019 Oct;51:88-95. doi: 10.1016/j.pbi.2019.05.011. Epub 2019 Jun 29.

Sato, H., Suzuki, T., Takahashi, F., Shinozaki, K., Yamaguchi-Shinozaki, K. NF-YB2 and NF-YB3 have functionally diverged and differentially induce drought and heat stress-specific genes. Plant Physiol. 2019 Jul;180(3):1677-1690. doi: 10.1104/pp.19.00391. Epub 2019 May 13.

Shinozawa, A., Otake, R., Takezawa, D., Umezawa, T., Komatsu, K., Tanaka, K., Amagai, A., Ishikawa, S., Hara, Y., Kamisugi, Y., Cuming, A.C., Hori, K., Ohta, H., Takahashi, F., Shinozaki, K., Hayashi, T., Taji, T., Sakata, Y. SnRK2 protein kinases represent an ancient system in plants for adaptation to a terrestrial environment. Commun Biol. 2019 Jan 21;2:30. doi: 10.1038/s42003-019-0281-1. eCollection 2019.

Ishikawa, S., Barrero, J., Takahashi, F., Peck, S., Gubler, F., Shinozaki, K., Umezawa T. Comparative phosphoproteomic analysis of barley embryos with different dormancy during imbibition. Int J Mol Sci. 2019 Jan 21;20(2):451. doi: 10.3390/ijms20020451.

Mizoi, J., Kanazawa, N., Kidokoro, S., Takahashi, F., Qin, F., Morimoto, K., Shinozaki, K., Yamaguchi-Shinozaki, K. Heat-induced inhibition of phosphorylation of the stress-protective transcription factor DREB2A promotes thermotolerance of Arabidopsis thaliana. J Biol Chem. 2019 Jan 18;294(3):902-917. doi: 10.1074/jbc.RA118.002662. Epub 2018 Nov 28.

Takahashi, F*., Shinozaki, K. Long-distance signaling in plant stress response. Curr Opin Plant Biol. 2019 Feb;47:106-111. doi: 10.1016/j.pbi.2018.10.006. Epub 2018 Nov 13.

2018

Sato, H., Takasaki, H., Takahashi, F., Suzuki, T., Iuchi, S., Mitsuda, N., Ohme-Takagi, M., Ikeda, M., Seo, M., Yamaguchi-Shinozaki, K., Shinozaki, K. Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3 gene during dehydration stress. Proc Natl Acad Sci U S A. 2018 Nov 20;115(47):E11178-E11187. doi: 10.1073/pnas.1811491115. Epub 2018 Nov 5.

Takahashi, F*., Kuromori, T., Sato, H., Shinozaki, K. Regulatory gene networks in drought stress responses and resistance in plants. Adv Exp Med Biol. 2018;1081:189-214. doi: 10.1007/978-981-13-1244-1_11.

Takahashi, F*., Suzuki, T., Osakabe, Y., Betsuyaku, S., Kondo, Y., Dohmae, N., Fukuda, H., Yamaguchi-Shinozaki, K., Shinozaki, K. A small peptide modulates stomatal control via abscisic acid in long-distance signalling. Nature. 2018 Apr;556(7700):235-238. doi: 10.1038/s41586-018-0009-2. Epub 2018 Apr 4.

2017

Morimoto, K., Ohama, N., Kidokoro, S., Mizoi, J., Takahashi, F., Todaka, D., Mogami, J., Sato, H,, Qin, F., Kim, J.S., Fukao, Y., Fujiwara, M., Shinozaki, K., Yamaguchi-Shinozaki, K. BPM-CUL3 E3 ligase modulates thermotolerance by facilitating negative regulatory domain-mediated degradation of DREB2A in Arabidopsis. Proc Natl Acad Sci U S A. 2017 Oct 3;114(40):E8528-E8536. doi: 10.1073/pnas.1704189114. Epub 2017 Sep 18.

Selvaraj, M.G., Ishizaki, T., Valencia, M., Ogawa, S., Dedicova, B., Ogata, T., Yoshiwara, K., Maruyama, K., Kusano, M., Saito, K., Takahashi, F., Shinozaki, K., Nakashima, K., Ishitani, M. Overexpression of an Arabidopsis thaliana galactinol synthase gene improves drought tolerance in transgenic rice and increased grain yield in the field. Plant Biotechnol J. 2017 Nov;15(11):1465-1477. doi: 10.1111/pbi.12731. Epub 2017 May 3.

Kidokoro, S., Yoneda, K., Takasaki, H., Takahashi, F., Shinozaki, K., Yamaguchi-Shinozaki, K. Different cold-signaling pathways function in the responses to rapid and gradual decreases in temperature. Plant Cell. 2017 Apr;29(4):760-774. doi: 10.1105/tpc.16.00669. Epub 2017 Mar 28.

Soma, F., Mogami, J., Yoshida, T., Abekura, M., Takahashi, F., Kidokoro, S., Mizoi, J., Shinozaki, K., Yamaguchi-Shinozaki, K. ABA-unresponsive SnRK2 protein kinases regulate mRNA decay under osmotic stress in plants. Nat Plants. 2017 Jan 6;3:16204. doi: 10.1038/nplants.2016.204.

2016

Ohama, N., Kusakabe, K., Mizoi, J., Zhao, H., Kidokoro, S., Koizumi, S., Takahashi, F., Ishida, T., Yanagisawa, S., Shinozaki, K., Yamaguchi-Shinozaki, K. The transcriptional cascade in the heat stress response of Arabidopsis is strictly regulated at the level of transcription factor expression. Plant Cell. 2016 Jan;28(1):181-201. doi: 10.1105/tpc.15.00435. Epub 2015 Dec 29.

2015

Takasaki, H., Maruyama, K., Takahashi, F., Fujita, M., Yoshida, T., Nakashima, K., Myouga, F., Toyooka, K., Yamaguchi-Shinozaki, K., Shinozaki, K.. SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence. Plant J. 2015 Dec;84(6):1114-23. doi: 10.1111/tpj.13067. Epub 2015 Dec 9.

Takahashi, F*., Tilbrook, J., Trittermann, C., Berger, B., Roy, S.J., Seki, M., Shinozaki, K., Tester, M. Comparison of Leaf sheath transcriptome profiles with physiological traits of bread wheat cultivars under salinity stress. PLoS One. 2015 Aug 5;10(8):e0133322. doi: 10.1371/journal.pone.0133322. eCollection 2015.

Mogami, J., Fujita, Y., Yoshida, T., Tsukiori, Y., Nakagami, H., Nomura, Y., Fujiwara, T., Nishida, S., Yanagisawa, S., Ishida, T., Takahashi, F., Morimoto, K., Kidokoro, S., Mizoi, J., Shinozaki, K., Yamaguchi-Shinozaki, K. Two distinct families of protein kinases are required for plant growth under high external Mg2+ concentrations in Arabidopsis. Plant Physiol. 2015 Mar;167(3):1039-57. doi: 10.1104/pp.114.249870. Epub 2015 Jan 22.

2014

Himuro, Y., Ishiyama, K., Mori, F., Gondo, T., Takahashi, F., Shinozaki, K., Kobayashi, M., Akashi, R. Arabidopsis galactinol synthase AtGolS2 improves drought tolerance in the monocot model Brachypodium distachyon. J Plant Physiol. 2014 Aug 15;171(13):1127-31. doi: 10.1016/j.jplph.2014.04.007. Epub 2014 Apr 26.

Umezawa, T., Takahashi, F., Shinozaki, K. Phosphorylation networks in the abscisic Acid signaling pathway. Enzymes. 2014;35:27-56. doi: 10.1016/B978-0-12-801922-1.00002-6.

2013

Mochida, K., Uehara-Yamaguchi, Y., Takahashi, F., Yoshida, T., Sakurai, T., Shinozaki, K. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. PLoS One. 2013 Oct 9;8(10):e75265. doi: 10.1371/journal.pone.0075265. eCollection 2013.

Umezawa, T., Sugiyama, N., Takahashi, F., Anderson, J.C., Ishihama, Y., Peck, S.C., Shinozaki, K. Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana. Sci Signal. 2013 Apr 9;6(270):rs8. doi: 10.1126/scisignal.2003509.

2011

Takahashi, F., Mizoguchi, T., Yoshida, R., Ichimura, K., Shinozaki, K. Calmodulin-dependent activation of MAP kinase for ROS homeostasis in Arabidopsis. Mol Cell. 2011 Mar 18;41(6):649-60. doi: 10.1016/j.molcel.2011.02.029.

Betsuyaku, S#., Takahashi, F#., Kinoshita, A., Miwa, H., Shinozaki, K., Fukuda, H., Sawa, S. Mitogen-activated protein kinase regulated by the CLAVATA receptors contributes to shoot apical meristem homeostasis. Plant Cell Physiol. 2011 Jan;52(1):14-29. doi: 10.1093/pcp/pcq157. Epub 2010 Oct 21. (#:equal contribution)

2007

Takahashi, F., Yoshida, R., Ichimura, K., Mizoguchi, T., Seo, S., Yonezawa, M., Maruyama, K., Yamaguchi-Shinozaki, K., Shinozaki, K. The mitogen-activated protein kinase cascade MKK3-MPK6 is an important part of the jasmonate signal transduction pathway in Arabidopsis. Plant Cell. 2007 Mar;19(3):805-18. doi: 10.1105/tpc.106.046581. Epub 2007 Mar 16.

2006

Fujita, M., Fujita, Y., Noutoshi, Y., Takahashi, F., Narusaka, Y., Yamaguchi-Shinozaki, K., Shinozaki, K. Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks. Curr Opin Plant Biol. 2006 Aug;9(4):436-42. doi: 10.1016/j.pbi.2006.05.014. Epub 2006 Jun 8.

Yoshida, R., Umezawa, T., Mizoguchi, T., Takahashi, S., Takahashi, F., Shinozaki, K. The regulatory domain of SRK2E/OST1/SnRK2.6 interacts with ABI1 and integrates abscisic acid (ABA) and osmotic stress signals controlling stomatal closure in Arabidopsis. J Biol Chem. 2006 Feb 24;281(8):5310-8. doi: 10.1074/jbc.M509820200. Epub 2005 Dec 19.

2002

Yoshida, R., Hobo, T., Ichimura, K., Mizoguchi, T., Takahashi, F., Aronso, J., Ecker, J.R., Shinozaki, K. ABA-activated SnRK2 protein kinase is required for dehydration stress signaling in Arabidopsis. Plant Cell Physiol. 2002 Dec;43(12):1473-83. doi: 10.1093/pcp/pcf188.