Publications

Selected Journal Publications

"ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure."

Cell, 164(1–12), 2016.

"Three-dimensional super-resolution and super-localization of dense clusters of single molecules." 

Scientific Reports, 4(5388), 2014.

"Sparse reconstructions of overlapping three-dimensional point spread functions using overcomplete dictionaries."

arXiv.org. arXiv:1308.6826 [physics.optics], Aug 2013.

"Super-resolution of dense nanoscale emitters beyond the diffraction limit using spatial and temporal information." 

Applied Physics Letters, 102(23):231103, 2013.

Patents

"3-D Localization And Imaging of Dense Arrays of Particles."

Patent Application number: US 14/777,361

Priority Date: Mar 15, 2013

(patent text available here, full PDF available here)

"Imaging or measurement methods and systems."

Patent Application number: US 14/409,397

Priority Date: Jun 22, 2012

(patent text available here, full PDF available here)

Additional Journal Publications

"A Planar four-port channel drop filter in the three-dimensional woodpile photonic crystal."

Optics express, 17(8):6128–33, April 2009.

Journal of Applied Physics, 105(10):103109, 2009.

IEEE Transactions on Magnetics, 41(10):3292–3294, October 2005.

Invited Talks

"Pushing the Limits of Wide-field Super-resolution Fluorescence  Microscopy: 3D, Dense Scenes, Faster Acquisition, Alternative Emitters... and more!"

In Guest Researcher Seminar Series (National Institute of Standards and Technology, Boulder, CO), 2015.

"Advancing Super-resolution Localization Microscopy: 3D, Dense Scenes, Faster Acquisition, Alternative Emitters, Thick Samples, and Multi-color."

In Advanced Light Microscopy Core Seminar Series (School of Medicine, University of Colorado Denver), 2015.

"Optical and Computational Super-resolution Methods for Dense Scenes in Fluorescence Microscopy."

In Special Optics Seminar Series (Weizmann Institute of Science, Rehovot, Israel), 2014.

"Optical and digital methods for super-resolution microscopy using quantum dot blinking, with extensions to three dimensions." In Energy Materials Nanotechnology Fall Meeting, 2013.


Conference Proceedings

"Dictionary Generation for Sparsity-based Three-dimensional Super-resolution Microscopy."

In Novel Techniques in Microscopy (Optical Society of America), 2015.

"Beyond Super-resolution Localization Microscopy: Extension to Three Dimensions, Dense Scenes, Fast Acquisition, and Drift-less, Multicolor Thick Samples."

In Focus on Microscopy, 2015.

"3D Optical Nanoscopic Photography via Single-Molecule Sparse Reconstructions."

In International Conference on Computational Photography (IEEE), 2015.

"3-D Super-resolution Localization Microscopy."

In Quantitative Biology Student Symposium (BioFrontiers Institute, University of Colorado), 2015.

"Compressive three-dimensional localization microscopy." 

In Computational Optical Sensing and Imaging (Optical Society of America), 2014.

"Three-dimensional super-resolution and super-localization of dense clusters of single molecules using sparse reconstructions."

In Quantitative Bioimaging Conference (University of New Mexico), 2014.

"Three-dimensional super-resolution of dense single molecule scenes for localization microscopy." 

In Frontiers in Optics (Optical Society of America), 2013.

"Statistical Independence of Quantum Dot Blinking Signals for Imaging Beyond the Diffraction Limit." 

In Computational Optical Sensing and Imaging (Optical Society of America), 2013.

"Use of Spatial and Temporal Information for Superresolution of Dense Quantum Dot Clusters." 

In Quantitative Bioimaging Conference (University of New Mexico), 2013.

"Super-resolution of Dense Quantum Dot Clusters using Independent Component Sorting." 

In Computational Optical Sensing and Imaging Conference (Optical Society of America), 2012.