Tools Description

EGFR-AP : Epidermal Growth Factor Receptor-Activity Predictor

https://github.com/amarinderthind/EGFR-ap

Decontaminer Tool

DecontaMiner is a tool for detecting contaminating organisms from unmapped RNASeq

Github : https://github.com/amarinderthind/decontaminer

http://www-labgtp.na.icar.cnr.it/decontaminer

Publication : From trash to treasure: detecting unexpected contamination in unmapped NGS data

CGRphylo

CGRphylo Pipeline: Chaos Game Representation for Phylogeny

https://github.com/amarinderthind/CGRphylo

Publication: Thind Singh Amarinder and Sinha Somdatta*, Using Chaos-Game-Representation for Analysing the SARS-CoV-2 Lineages, Newly Emerging Strains and Recombinants, Current Genomics 2023; 24 (3)

RankerGUI Pipeline

RankerGUI : a web application for comparing and characterising differential expression profiles obtained from the different experiments. http://watson.na.icar.cnr.it/rankergui/

Publication: RankerGUI: A Computational Framework to Compare Differential Gene Expression Profiles Using Rank Based Statistics

MycoInDb Database

MycoBacterium information database http://bif.uohyd.ac.in/mycoindb/

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