2025
Dong Hoon Shin*, Sung Hyun Kim*, Kush Coshic, Kenji Watanabe, Takashi Taniguchi, Gerard Verbiest, Sabina Caneva, Aleksei Aksimentiev, Peter G. Steeneken#, Chirlmin Joo#
"Diffusion of DNA on Atomically Flat 2D Material Surfaces"
ACS Nano 19, 21307 (2025)
*Equal contribution, #co-correspondence
Carolien Bastiaanssen, Ivo Severins, John van Noort#, Chirlmin Joo#
"Single-molecule parallel analysis for rapid exploration of sequence space"
Nat. Protoc. (2025)
#co-correspondence
Mike Filius, Lena Fasching, Raman van Wee, Alina Y. Rwei, Chirlmin Joo
"Decoding aptamer-protein binding kinetics for continuous biosensing using single-molecule techniques"
Science Advances 11, eads9687 (2025)
2024
Moon Hyeok Choi and Chirlmin Joo
"A major step forward toward high-resolution nanopore sequencing of full-length proteins"
Molecular Cell 84, 4264 (2024)
Ivo Severins, Carolien Bastiaanssen, Sung Hyun Kim, Roy B. Simons, John van Noort*, Chirlmin Joo*
"Single-molecule structural and kinetic studies across sequence space"
Science 385, 898 (2024).
*co-correspondence
Carolien Bastiaanssen, Pilar Bobadilla Ugarte, Kijun Kim, Giada Finocchio, Yanlei Feng, Todd A. Anzelon, Stephan Köstlbacher, Daniel Tamarit, Thijs J. G. Ettema, Martin Jinek, Ian J. MacRae, Chirlmin Joo*, Daan C. Swarts* & Fabai Wu*
"RNA-guided RNA silencing by an Asgard archaeal Argonaute"
Nature Communications 15, 5499 (2024).
*co-correspondence
Bhagyashree S. Joshi, Carlos de Lannoy, Mark R. Howarth, Sung Hyun Kim*, and Chirlmin Joo*
"iMAX FRET (Information Maximized FRET) for Multipoint Single-Molecule Structural Analysis"
Nano Letters. 24, 8487 (2024)
*co-correspondence
Mike Filius, Raman van Wee, Carlos de Lannoy, Ilja Westerlaken, Zeshi Li, Sung Hyun Kim, Cecilia de Agrela Pinto, Yunfei Wu, Geert-Jan Boons, Martin Pabst, Dick de Ridder & Chirlmin Joo
"Full-Length Single-Molecule Protein Fingerprinting"
Nature Nanotech. 19, 652 (2024)
2023
Dong Hoon Shin, Hakseong Kim, Sung Hyun Kim, Hyeonsik Cheong, Peter G. Steeneken, Chirlmin Joo, Sang Wook Lee
"Graphene nano-electromechanical mass sensor with high resolution at room temperature"
iScience, 26, 105958 (2023)
2022
Miri Seo, Eunseo Yang, Dong Hoon Shin, Yugyeong Je, Chirlmin Joo, Kookjin Lee, and Sang Wook Lee
"Classifiable Limiting Mass Change Detection in a Graphene Resonator Using Applied Machine Learning"
ACS Appl. Electron. Mater. 4, 5184 (2022)