Publications

Peer-reviewed publications (Click here for Google Scholar Profile)

34.  Soumik Siddhanta, Andrey N Kuzmin, Artem Pliss, Alexander S Baev, Sunil K Khare, Pramit K Chowdhury, Ashok K Ganguli, Paras N Prasad, Advances in Raman spectroscopy and imaging for biomedical research, Advances in Optics and Photonics, 2023, 15 (2), 318-384.

33. Ruchi Singh, Vikas Yadav, Ashish Kumar Dhillon, Arti Sharma, Tripti Ahuja, Soumik Siddhanta, Emergence of Raman Spectroscopy as a Probing Tool for Theranostics, Nanotheranostics, 2023, 7 (3), 216-235.

32. Arti Sharma, Soumya Mondal, Tripti Ahuja, Tarak Karmakar, Soumik Siddhanta, Ion-Mediated Protein Stabilization on Nanoscopic Surfaces, Langmuir 2023, 39, 3, 1227–1237.

31. Sonam Kumari, Ruchi Singh, Teena Teena, Soumik Siddhanta, Shashank Deep, Biophysical Characterization and Interaction study of WhiB6 Protein of Mycobacterium tuberculosis with Nucleic Acid, bioRxiv, 2023.03. 01.530725.

30. Ruchi Singh, Vikas Yadav, Soumik Siddhanta,Probing plasmon-induced surface reactions using two-dimensional correlation vibrational spectroscopy, Physical Chemistry Chemical Physics, 2023, 25 (8), 6032-6043.

29. Jiro Karlo, Ashish Kumar Dhillon, Soumik Siddhanta, Surya Pratap Singh, Monitoring of microbial proteome dynamics using Raman stable isotope probing, Journal of Biophotonics, 2022, e202200341.

28. Vikas Yadav, Soumik Siddhanta, Engineering chiral plasmonic nanostructures for gain-assisted plasmon amplification and tunable enhancement of circular dichroism, Materials Advances, 2022,  3 (3), 1825-1833.

27.  Rachel Rex, Soumik Siddhanta, Ishan Barman, Role of Aqueous-Phase Calcination in Synthesis of Ultra-Stable Dye-Embedded Fluorescent Nanoparticles for Cellular Probing, Applied Spectroscopy, 2021, 75 (8), 1012-1021.

26. Chi Zhang,# Soumik Siddhanta,# Debadrita Paria, Yaozheng Li, Chao Zheng, Ishan Barman, Spectroscopy‐assisted label‐free molecular analysis of live cell surface with vertically aligned plasmonic nanopillars, Small, 2021, 17 (21), 2100161.

25. Shantanu Aggarwal, Sayan Mondal, Soumik Siddhanta, Engleng Bharat, Easa Nagamalleswari, Valakunja Nagaraja, Chandrabhas Narayana, Divalent ion-induced switch in DNA cleavage of KpnI endonuclease probed through surface-enhanced Raman spectroscopy, The Journal of Physical Chemistry B, 2021, 125 (9), 2241-2250.

24. Yue Yuan, Piyush Raj, Jia Zhang, Soumik Siddhanta, Ishan Barman, Jeff W M Bulte, "Furin-Mediated Self-Assembly of Olsalazine Nanoparticles for Targeted Raman Imaging of Tumors", Angewandte Chemie International Edition, 2020, Dec 15. doi: 10.1002/anie.202014839. 

23. Zufang Huang,* Soumik Siddhanta,* Gang Zheng, Thomas Kickler and Ishan Barman, “Rapid, label‐free optical spectroscopy platform for diagnosis of heparin‐induced thrombocytopenia”, Angewandte Chemie International Edition, 2020, 59 (15), 5972-5978. (*Equal contribution). 

Before joining IIT Delhi

22. Yue Yuan, Jia Zhang, Xiaoliang Qi, Shuoguo Li, Guanshu Liu, Soumik Siddhanta, Ishan Barman, Xiaolei Song, Michael T McMahon, Jeff WM Bulte. “Furin-mediated intracellular self-assembly of olsalazine nanoparticles for enhanced magnetic resonance imaging and tumour therapy”, Nature Materials, 2019, 18 (12), 1376-1383. 

21. Soumik Siddhanta, Sourav Bhattacharjee, Sabine M Harrison, Dimitri Scholz, Ishan Barman. "Shedding Light on the Trehalose‐Enabled Mucopermeation of Nanoparticles with Label‐Free Raman Spectroscopy", Small 15.33 (2019): 1901679.

20. Zufang Huang, Arun Nagpal, Soumik Siddhanta, and Ishan Barman, “Leveraging coffee‐ring effect on plasmonic paper substrate for sensitive analyte detection using Raman spectroscopy”, Journal of Raman Spectroscopy, 2018, 49 (9), 1552-1558. 

19. Zufang Huang,* Soumik Siddhanta,* Chi Zhang, Thomas Kickler, Gang Zheng and Ishan Barman, “Painting and heating: A nonconventional, scalable route to sensitive biomolecular analysis with plasmon‐enhanced spectroscopy”, Journal of Raman Spectroscopy, 2017, 48 (10), 1365-1374. (*Equal contribution). 

18. Soumik Siddhanta, Santosh Kumar Paidi, Kathryn Bushley, Ram Prasad and Ishan Barman, “Exploring Morphological and Biochemical Linkages in Fungal Growth with Label‐Free Light Sheet Microscopy and Raman Spectroscopy”, ChemPhysChem, 2017, 18, 72–78. (Selected as Backside Cover Page Article) 

17. Arvind Kumar, Soumik Siddhanta and Harish C. Barshilia, “Extraordinary high broadband specular transmittance of sodalime glass substrate by vapor phase etching”, Solar Energy, 2016, 129, 147–155. 

16. Santosh Kumar Paidi, Soumik Siddhanta, Robert J Strouse, James B McGivney, Christopher Larkin, Ishan Barman, “Rapid identification of biotherapeutics with label-free raman spectroscopy”, Analytical Chemistry, 2016, 88 (8), 4361 - 4368. 

15. Soumik Siddhanta, Maciej S Wróbel and Ishan Barman, “Integration of protein tethering in a rapid and label-free SERS screening platform for drugs of abuse”, Chemical Communications, 2016, 52, 9016-9019. (Selected as Backside Cover Page Article) 

14. Soumik Siddhanta, Chao Zheng, Chandrabhas Narayana and Ishan Barman, “An impediment to random walk: trehalose microenvironment drives preferential endocytic uptake of plasmonic nanoparticles”, Chemical Science, 2016, 7, 3730. 2 

13. Dhanasekaran Karthigeyan, Surabhi Sudevan, Pushpak Mizar, Soumik Siddhanta, Amrita Banerjee, Sarmistha Sinha, Dipak Dasgupta, Chandrabhas Narayana and Tapas Kundu, “A Dual Non‐ATP Analogue Inhibitor of Aurora Kinases A and B, Derived from Resorcinol with a Mixed Mode of Inhibition”, Chemical Biology & Drug Design, 2016, 87(6), 958-967. 

12. Arvind Kumar, Harish Chaliyawala, Soumik Siddhanta, Harish C. Barshilia, “Broadband quasi-omnidirectional sub-wavelength nanoporous antireflecting surfaces on glass substrate for solar energy harvesting applications”, Solar Energy Materials & Solar Cells, 2016, 145, 432- 439.

11. Varun Thakur, Soumik Siddhanta, Chandrabhas Narayana and S. M. Shivaprasad, “Size and distribution control of surface plasmon enhanced photoluminescence and SERS signal in Ag–GaN hybrid systems”, RSC Advances, 2015, 5 (129), 106832-106837. 

10. Ritu Gupta,* Soumik Siddhanta,* Gangaiah Mettela,* Chandrabhas Narayana and G. U. Kulkarni, “Solution processed nanomanufacturing of SERS substrates with random Ag nanoholes exhibiting uniformly high enhancement factors”, RSC Advances, 2015, 5 (103), 85019-85027 (* Equal contribution) 

9. Soumik Siddhanta, Ishan Barman and Chandrabhas Narayana, “Revealing the trehalose mediated inhibition of protein aggregation through lysozyme–silver nanoparticle interaction”, Soft Matter, 2015, 11 (37), 7241-7249. 

8. Nitant Gupta, Disha Gupta, Shantanu Aggarwal, Soumik Siddhanta, Chandrabhas Narayana and Harish Barshilia, “Thermally stable plasmonic nanocermets grown on microengineered surfaces as versatile surface enhanced Raman spectroscopy sensors for multianalyte detection”, ACS Applied Materials & Interfaces, 2014, 6 (24), 22733-22742. 

7. Dhanasekaran Karthigeyan,* Soumik Siddhanta,* Annavarapu Hari Kishore,* Sathya SRR Perumal, Hans Aren, Surabhi Sudevan, Akshay V Bhat, Karanam Balasubramanyam, Rangappa Kanchugarakoppal Subbegowda, Tapas K Kundu, Chandrabhas Narayana, “SERS and MD simulation studies of a kinase inhibitor demonstrate the emergence of a potential drug discovery tool”, Proceedings of the National Academy of Sciences, USA, 2014, 111 (29), 10416- 10421. (*Equal contribution). 

6. Gangaiah Mettela,* Soumik Siddhanta,* Chandrabhas Narayana and Giridhar U. Kulkarni, “Nanocrystalline Ag microflowers as a versatile SERS platform", Nanoscale, 2014, 6, 7480- 7488.(*Equal contribution). 

5. Mohankrishna Dalvoy Vasudevarao, Pushpak Mizar, Sujata Kumari, Somnath Mandal, Soumik Siddhanta, Mahadeva MM Swamy, Stephanie Kaypee, Ravindra C Kodihalli, Amrita Banerjee, Chandrabhas Naryana, Dipak Dasgupta and Tapas K. Kundu, “Naphthoquinone-mediated inhibition of lysine acetyltransferase KAT3B/p300, basis for non-toxic inhibitor synthesis”, Journal of Biological Chemistry, 2014, 289 (11), 7702-7717. 

4. Soumik Siddhanta, Dhanasekaran Karthigeyan, Partha P. Kundu, Tapas K. Kundu and Chandrabhas Narayana, “Surface enhanced Raman spectroscopy of Aurora kinases: direct, ultrasensitive detection of autophosphorylation", RSC Advances, 2013, 3 (13), 4221-4230. 

3. Soumik Siddhanta and Chandrabhas Narayana, “Surface enhanced Raman spectroscopy of proteins: Implications in drug designing”, Nanomaterials and Nanotechnology, 2012, 2 (1), 1-13. 

2. Soumik Siddhanta, Varun Thakur, Chandrabhas Narayana and S.M. Shivaprasad, “Universal metal-semiconductor hybrid nanostructured SERS substrate for biosensing”, ACS Applied Materials & Interfaces, 2012, 4 (11), 5807-5812. 

1. Sudip Mohapatra, Soumik Siddhanta, D. Ravinder Kumar, Chandrabhas Narayana and Tapas Kumar Maji, “Facile and green synthesis of SERS active and ferromagnetic silver nanorods”, European Journal of Inorganic Chemistry, 2010 (31), 4969-4974.

Book Chapter:

3. Vikas, Ruchi Singh, Arti Sharma, Ashish Kumar Dhillon, Soumik Siddhanta, The Role of Metals in Nanocomposites for UV and Visible Light-Active Photocatalysis, Green Photocatalytic Semiconductors, 2022, 307-335.

2. SP Singh, Soumik Siddhanta, Optical Imaging in Biology: Basics and Applications, Modern Techniques of Spectroscopy: Basics, Instrumentation, and Applications, 2021, 637-660.

1. Mohammed Arif,* Dhanasekaran Karthigeyan,* Soumik Siddhanta,* G.V. Pavan Kumar, Chandrabhas Narayana and Tapas K. Kundu, “Analysis of Protein Acetyltransferase Structure–Function Relation by Surface-Enhanced Raman Scattering (SERS): A Tool to Screen and Characterize Small Molecule Modulators”, Methods in molecular biology (Clifton, N.J.) 01/2013; 981:239-61.(*Equal contribution).

Article Highlights:

1. Re-thinking mucus-penetrating nanoparticles using natural sugars

2. A simple method for preventing nanoparticle-protein aggregation