Software

R package

ancombcVizhelper

Provides tools to tidy, summarize, and visualize differential abundance results generated by ANCOM-BC2. The package converts ANCOM-BC2 model output into a standardized tidy format and generates customizable, publication-ready visualizations, including log-fold change plots and heatmaps.

Code: https://github.com/KitHubb/ancombcVizhelper

Pipeline

ITSdetector

A reproducible Nextflow workflow for fungal ITS amplicon sequencing analysis, designed for robust preprocessing, benchmarking, and taxonomic assignment of ITS1 and ITS2 datasets.

Code: https://github.com/KitHubb/ITSdetector

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