Publications

Current Publications:

Temporal links between ambient air pollutants and antifungal resistance dynamics in Candida glabrata: Insights from the Vivli AMR data challenge

S Haryini, S Karve, GPD C - Wellcome Open Research, 2026

Genomic landscape of antimicrobial resistance in India: findings from a multi-species surveillance study

Nazneen Gheewalla, Vasundhara Karthikeyan, Yuvraj Jadhav, Kirti Kulkarni, Akansha Tyagi, Jaisri Jagannadham, Sandeep Budhiraja, Bansidhar Tarai, Maithili Kavathekar, Shraddha Karve - npj Antimicrobials and Resistance 4 (1), 13

Multiplex PCR assay for the rapid detection of Klebsiella pneumoniae pathotypes

Sanika Mahesh Kulkarni, Jobin John Jacob, T Praveen, V Aravind, R Subbulakshmi, S Preethi, Binesh Lal, Karthik Gunasekaran, Abi Manesh, Shraddha M Karve, J Sudarsana, Sanjay Bhattacharya, Anand Shah, Savitha Nagaraj, Priyadarshini Padaki, S Jayakumar, Renu Mathew, SM Rudresh, Shariqa Qureshi, S Nivedhana, Geethu Joe, Ekadashi Rajni, Kamini Walia, Balaji Veeraraghavan - Journal of Medical Microbiology 74 (10), 002090

Genomic insights into six clinical isolates of Stenotrophomonas maltophilia from Northern India
Nazneen Gheewalla, Yuvraj Jadhav, Jaisri Jagannadham, Akansha Tyagi, Sandeep Budhiraja, Bansidhar TARAI, Shraddha Madhav Karve - BioRxiv Preprint,2025

Evolutionary Novelties in Bacteria and the Missing Backdrop of the Environment
S Karve - Environmental Microbiology, 2025

PathCrisp: An Innovative Molecular Diagnostic Tool for Early Detection of NDM-Resistant Infections
Shrigouri Patil, Annes Siji, Dhrithi Mallur, Nazneen Gheewalla, Shraddha Karve, Maithili Kavathekar, Bansidhar Tarai, Mandar Naik, B. S. Kruthika, Vandana Hegde, Jayaprada Rangineni, Vaijayanti Gupta, Vijay Chandru, Bulagonda Eswarappa Pradeep, Reety Arora - Sci Rep 15, 490 (2025)

Genomic sequencing should extend to diverse priority pathogens for effective study and surveillance of antimicrobial resistance: a systematic review of whole-genome sequencing studies from India
N Gheewalla, J Jagannadham, R Kutum, S Karve - bioRxiv, 2023

Shraddha's previous publications:

‪Low protein expression enhances phenotypic evolvability by intensifying selection on folding stability‬‪S Karve, P Dasmeh, J Zheng, A Wagner.‬, ‪Nature Ecology and Evolution, 2022‬ - ‪Cited by 6‬

‪Environmental complexity is more important than mutation in driving the evolution of latent novel traits in E. coli‬‪S Karve, A Wagner‬, ‪Nature Communications, 2022‬ - ‪Cited by 7‬

‪Multiple novel traits without immediate benefits originate in bacteria evolving on single antibiotics‬‪S Karve, A Wagner‬, ‪Molecular biology and evolution, 2022‬ - ‪Cited by 8‬

‪Adapting in larger numbers can increase the vulnerability of Escherichia coli populations to environmental changes‬‪Y Chavhan, S Karve, S Dey‬, ‪Evolution, 2019‬ - ‪Cited by 8‬

‪Extent of adaptation is not limited by unpredictability of the environment in laboratory populations of Escherichia coli‬‪SM Karve, D Bhave, S Dey‬, ‪Journal of evolutionary biology, 2018‬ - ‪Cited by 8‬

‪Junior researchers: Hasty publication compromises rigour‬‪SM Karve, M Mangalam‬, ‪Nature, 2016‬

‪Environmental fluctuations do not select for increased variation or population-based resistance in Escherichia coli‬‪SM Karve, K Tiwary, S Selveshwari, S Dey‬, ‪Journal of Biosciences, 2016‬ - ‪Cited by 7‬

‪Escherichia coli populations adapt to complex, unpredictable fluctuations by minimizing trade-offs across environments‬‪S Karve, D Bhave, D Nevgi, S Dey‬, ‪Journal of Evolutionary biology, 2016‬ - ‪Cited by 17‬