Evaluation results

Participating teams

Four teams participated to the SeeDev-binary task and submitted 6 runs:

  • MIC-CIS (1 run)
  • YNUBY (2 runs)
  • YNU-junyi (1 run)
  • Yunnan University 1510 (2 runs)

Evaluation

You may check and evaluate your predictions:

The evaluation is described on the BioNLP-ST 2016 SeeDev page.

You can download all the charts and tables shown below.

Global results

Here are the global results for each run expressed in F1, Recall and Precision.

The confidence interval has been obtained by bootstrap resampling (n=100).

Results by relation type

Each axis represents a different type of relation.

Relations by type cluster

Relation types have been gathered by cluster of similar types, thus reducing the number of categories of relations.

  • Comparison: Is_Functionally_Equivalent_To, Has_Sequence_Identical_To
  • Interaction: Interacts_With, Binds_To
  • Composition_Membership: Composes_Primary_Structure, Composes_Protein_Complex, Is_Protein_Domain_Of, Is_Member_Of_Family, Has_Sequence_Identical_To
  • Genic_Regulation: Regulates_Accumulation, Regulates_Expression, Regulates_Molecule_Activity, Binds_To, Interacts_With
  • Regulation: Regulates_Accumulation, Regulates_Development_Phase, Regulates_Expression, Regulates_Molecule_Activity, Regulates_Process, Regulates_Tissue_Development
  • Function: Is_Involved_In_Process, Transcribes_Or_Translates_To, Is_Functionally_Equivalent_To

Ignoring relation types and direction

The tick on each bar indicates the gain compared to the global results.