Publications

RESEARCH ARTICLES

1. Sarhadi TR, Joshi N & Nagotu S (2025) The Yeast Parkinson’s Disease Model Exhibits An Increase in Peroxisome Number Independent of the Division Proteins Vps1 and Dnm1. Molecular Neurobiology. doi: https://doi.org/10.1007/s12035-025-05236-2. Publisher - Springer; IF – 4.3  Read here

2. Adhikary A, Joseph VJ, Banerjee R, Nagotu S (2025) Yeast Dnm1G178R causes altered organelle dynamics and sheds light on the human DRP1G149R disease mechanism. Mitochondrion. doi: https://doi.org/10.1016/j.mito.2025.102006. Publisher - Elsevier; IF – 4.5  Read here

3. Banerjee R, Mukherjee A, Adhikary A, Sharma S, Hussain MS, Ali ME, Nagotu S (2023) Insights into the role of the conserved GTPase domain residues T62 and S277 in yeast Dnm1. International Journal of Biological Macromolecules. doi: https://doi.org/10.1016/j.ijbiomac.2023.127381. Publisher - Elsevier; IF – 8.5 This manuscript was highlighted in the annual newsletter of Indian Society of Cell Biology (2023).  Read here

4. Joshi N, Sarhadi TR, Raveendran A, Nagotu S (2023) Sporadic SNCA mutations A18T and A29S exhibit variable effects on protein aggregation, cell viability and oxidative stress. Molecular Biology Reports. doi: 10.1007/s11033-023-08457-7. Publisher - Springer; IF – 2.8  Read here

5. Deori NM, Infant T, Thummer RP, Nagotu S (2022) Characterization of the multiple domains of Pex30 involved in subcellular localization of the protein and regulation of peroxisome number. Cell Biochemistry and Biophysics. doi: 10.1007/s12013-022-01122-z.Publisher - Springer; IF – 2.6  Read here

6. Deb R, Nagotu S (2022) The nexus between peroxisome abundance and chronological ageing in Saccharomyces cerevisiae. Biogerontology. doi: 10.1007/s10522-022-09992-9 Publisher - Springer; IF – 4.5  Read here

7. Deb R, Ghose S, Nagotu S (2022) Increased peroxisome proliferation is associated with early yeast replicative ageing. Current Genetics. doi: 10.1007/s00294-022-01233- Publisher - Springer; IF – 2.5  Read here

8. Deori NM, Infant T, Sundaravadivelu PK, Thummer RP, Nagotu S (2022) Pex30 undergoes phosphorylation and regulates peroxisome number in Saccharomyces cerevisiae. Molecular Genetics and Genomics. doi: 10.1007/s00438-022-01872-8. Publisher - Springer; IF – 3.1 Read here

9. Banerjee R, Kumar A, Satpati P and Nagotu S (2021) Mimicking human Drp1 disease-causing mutations in yeast Dnm1 reveals altered mitochondrial dynamics. Mitochondrion https://doi.org/10.1016/j.mito.2021.06.009 Publisher - Elsevier; IF – 4.5  Read here

10. Glingston S, Rajpoot J, Deori NM, Deb R, Kumar S and Nagotu S (2021) Characterization of nucleocapsid and matrix proteins of Newcastle disease virus in yeast. 3 Biotech 11, 65. https://doi.org/10.1007/s13205-020-02624- Publisher - Springer; IF – 2.8  Read here

11. Banerjee R, Deb R, Roy K, Chatterjee S, Nagotu S (2019) Uptake and intracellular fate of nona-arginine peptide in yeast. Peptide Science: doi.org/10.1002/pep2.24101 Publisher - Wiley; IF – 2.6  Read here

12. Cepinska M, Veenhuis M, van der Klei IJ, Nagotu S (2011) Peroxisome fission is associated with reorganization of specific membrane proteins. Traffic.12: 925-37. Publisher - Wiley; IF – 4.5  Read here

13. Nagotu S, Krikken AM, Otzen M, Kiel JA, Veenhuis M, van der Klei IJ (2008) Peroxisome fission in Hansenula polymorpha requires Mdv1 and Fis1, two proteins also involved in mitochondrial fission. Traffic. 9: 1471–1484. Publisher - Wiley; IF – 4.5  Read here

14. Nagotu S, Saraya R, Otzen M, Veenhuis M, van der Klei IJ (2008) Peroxisome proliferation in Hansenula polymorpha requires Dnm1p which mediates fission but not de novo formation. Biochim Biophys Acta – Molecular Cell Research. 1783: 760–769. Publisher - Elsevier; IF – 5.1  Read here

15. Otzen M, Krikken AM, Ozimek PZ, Kurbatova E, Nagotu S, Veenhuis M, van der Klei IJ (2006) In the yeast Hansenula polymorpha, peroxisome formation from the ER is independent of Pex19p, but involves the function of p24 proteins. FEMS Yeast Res. 6: 1157–1166. Publisher – Oxford academic; IF – 3.2  Read here

16. Kuravi K, Nagotu S, Krikken AM, Sjollema K, Deckers M, Erdmann R, Veenhuis M, van der Klei IJ (2006) Dynamin-related proteins Vps1p and Dnm1p control peroxisome abundance in Saccharomyces cerevisiae. Journal of Cell Science. 119: 3994–4001. Publisher – Company of biologists; IF – 4.0  Read here

COLLABORATIVE ARTICLES

17. Radke J, Nagotu S, Girzalsky W, Chakraborty A, Deckers M., Schuldiner M, ... & Erdmann R (2021) Identification of Pex34p as a component of the peroxisomal de novo biogenesis machinery in yeast. bioRxiv.  Read here

18. Narayan G, Agrawal A, Sen P, Nagotu S, Thummer RP (2023) Production of Bioactive Human PAX4 protein from E. coli. The Protein Journal. doi: 10.1007/s10930-023-10143-3. Publisher – Springer; IF – 3.0  Read here

19. Narayan G, Agrawal A, Joshi N, Gogoi R, Nagotu S, Thummer RP (2021) Protein Production and Purification of a Codon-Optimized Human NGN3 Transcription Factor from E. coli. The Protein Journal. doi: 10.1007/s10930-021-10020-x. Publisher – Springer; IF – 3.0  Read here

20. Pathak S, Gupta R, Parkar H, Joshi N, Nagotu S, Kale A (2021) The role of Colchicine on actin polymerization dynamics: as a potent anti-angiogenic factor. Journal of Biomolecular Structure & Dynamics. Publisher – Taylor and Francis Ltd.; IF – 4.4  Read here

21. Narayan G, Sundaravadivelu PK, Agrawal A, Gogoi R, Nagotu S & Thummer RP (2021) Soluble expression, purification, and secondary structure determination of human PDX1 transcription factor. Protein Expression and Purification, 105807. Publisher – ScienceDirect; IF – 1.6  Read here

22. Pathak S, Tripathi S, Deori N, Ahmad B, Verma H, Lokhande R, Nagotu S, Kale A (2021) Effect of Tetracycline family of antibiotics on actin aggregation, resulting in the formation of Hirano bodies responsible for neuropathological disorders. Journal of Biomolecular Structure & Dynamics. doi:: 10.1080/07391102.2020.1717629. Publisher – Taylor and Francis Ltd.; IF – 4.4  Read here

23. Pathak S, Deori N, Sharma A, Nagotu S & Kale A (2020) In vitro, in vivo and in silico rationale for the muscle loss due to therapeutic drugs used in the treatment of Mycobacterium tuberculosis infection. Journal of Biomolecular Structure and Dynamics, 1-17. Publisher – Taylor and Francis Ltd.; IF – 4.4  Read here

24. Maurya PK, Kumar P, Nagotu S, Chand S, Chandra P (2016) Multi-target detection of oxidative stress biomarkers in quercetin and myricetin treated human red blood cells. Royal Society Of Chemistry Advances 6 (58): 53195-53202. Publisher – Royal Society Of Chemistry Publishing; IF – 3.9 Read here

REVIEW ARTICLES/ BOOK CHAPTERS

25. Adhikary A, Mukherjee A, Banerjee R, Nagotu S (2023) DRP1: At the crossroads of dysregulated mitochondrial dynamics and altered cell signaling in cancer cells. American Chemical Society Omega. doi: https://doi.org/10.1021/acsomega.3c06547. Publisher – American Chemical Society Publications; IF – 4.1  Read here

26. Sarhadi TR, Panse JS, Nagotu S (2023) Mind the gap: Methods to study membrane contact sites. Experimental Cell Research. doi: https://doi.org/10.1016/ j.yexcr.2023.113756. Publisher – ScienceDirect; IF – 3.7  Read here

27. Kashyap I, Deb R, Battineni A, Nagotu S (2023) Acyl CoA oxidase: from its expression, structure, folding, and import to its role in human health and disease. Molecular Genetics and Genomics. doi: 10.1007/s00438-023-02059-5. Publisher – Springer; IF – 3.1 Read here

28. Deori NM, Nagotu S (2022) Peroxisome biogenesis and inter-organelle communication: an indispensable role for Pex11 and Pex30 family proteins in yeast. Current Genetics. doi: 10.1007/s00294-022-01254. Publisher – Springer; IF – 2.4  Read here

29. Banerjee R, Mukherjee A, Nagotu S (2022) Mitochondrial dynamics and its impact on human health and diseases: inside the DRP1 blackbox. Journal of Molecular Medicine. doi: 10.1007/s00109-021-02150-7. Publisher – Springer; IF – 4.096  Read here

30. Infant T, Deb R, Ghose S, Nagotu S (2021) Post-translational modifications of proteins associated with yeast peroxisome membrane: An essential mode of regulatory mechanism. Genes to Cells. doi: 10.1111/gtc.12892. Publisher – Wiley; IF – 2.1  Read here

31. Glingston S, Yadav J, Rajpoot J, Joshi N and Nagotu S (2021) "Contribution of yeast models to virus research", Applied Microbiology and Biotechnology. doi: https://doi.org/10.1007/s00253-021-11331-w. Publisher – Springer; IF – 5.2  Read here

32. Deb R, Joshi N, Nagotu S (2021) Peroxisomes of the Brain: Distribution, functions and associated diseases. Neurotoxicity Research. doi:10.1007/s12640-020-00323-9. Publisher – Springer; IF – 3.7  Read here

33. Joshi N, Atchaya SR, Nagotu S (2020) Chaperones and Proteostasis: Role in Parkinson's Disease. Diseases:8(2):E24. doi: 10.3390/diseases8020024. Publisher – MDPI; IF – 3.7  Read here

34. Banerjee R, Joshi N, Nagotu S (2020) Cell organelles and yeast longevity: an intertwined regulation. Current Genetics. doi: 10.1007/s00294-019-01035-0. Publisher – Springer; IF – 2.5  Read here

35. Glingston RS, Deb R, Kumar S, Nagotu S (2018) Organelle dynamics and viral infections: at cross roads. Microbes and Infection; doi:10.1016/j.micinf.2018.06.002. Publisher – ScienceDirect; IF – 5.8  Read here

36. Deori NM, Kale A, Maurya PK, Nagotu S (2018) Peroxisomes: role in cellular ageing and age related disorders. Biogerontology. doi: 10.1007/s10522-018-9761-9. Publisher – Springer; IF – 4.5 Read here

37. Deb R, Nagotu S (2017) Versatility of peroxisomes: An evolving concept. Tissue and Cell. doi: http://dx.doi.org/10.1016/j.tice.2017.03.002. Publisher – ScienceDirect; IF – 2.6  Read here

38. Deori NM, Deb R, Banerjee R, Nagotu S (2018) Yeast: A Multifaceted Eukaryotic Microbe and Its Biotechnological Applications. In book: Advances in Microbial Biotechnology Current Trends and Future Prospects. Publisher: APPLE ACADEMIC PRESS  Read here

39. Nagotu S, Kalel VC, Platta H, Erdmann R (2012) Molecular basis of peroxisomal biogenesis disorders caused by defects in peroxisomal matrix protein import. Biochim Biophys Acta – Molecular Basis of Disease. doi: 1822: 1326–1336. Publisher – ScienceDirect; IF – 6.2 Read here

40. Nagotu S, Veenhuis M, van der Klei IJ (2010) Divide et impera: the dictum of peroxisomes. Traffic. doi:11:175-84. Publisher – Wiley; IF – 4.5  Read here