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Main research interest of the group lies in underpinning the molecular mechanisms involved during human brain development. We aim to extend the research in two directions –
1.) role of non-coding RNAs in neurodevelopmental disorders
2.) molecular mechanisms involved in cortical brain expansion in primates, which is thought to be a critical determinant of intellectual ability. Understanding what makes human brain unique and intellectually superior from other species is one of the objectives. Specifically we are interested in studying non-coding RNAs.
When the human genome project mapped its first chromosome in 1999, it was predicted the genome would contain over 100,000 protein coding genes. However, only around 20,000 were eventually identified. Since then, there has been an increase in the no. of identified non-coding genes as compared to the protein coding genes. Non-coding genome constitute ~99% of whole genome whereas 1% of the genome constitute coding genes encoding proteins. For decades it was considered that only the highly conserved protein coding genes were involved in basic cell functions. But later, functional non-coding RNAs were discovered.
microRNAs (miRNAs) are a class of small non-coding RNAs involved in post-transcriptional regulation of gene expression and thereby, play an important role in fine-tuning or restricting cellular identities by targeting important genes and pathways. In contrast to coding genes, non-coding transcripts increase in diversity with organismal complexity, and they are particularly diverse in the brain. Therefore, the discovery of non-coding RNAs offer a strong potential for revealing the basis of primate brain expansion and neurodevelopmental diseases associated with humans or primates.
During cortical development, majority of neural progenitor cells are neuroepithelial cells (NE) which divide symmetrically to self-renew in the ventricular zone (VZ). Later on, NE cells are replaced by apical radial glia (aRG) cells or ventricular radial glia (vRG) cells with long basal process, which divide symmetrically to self-renew or asymmetrically to generate another RG and either an intermediate progenitor (IP) cell or neuron. Another category of radial glia cells known as basal radial glia (bRG) or outer radial glia (oRG) are positioned in outer sub-ventricular zone (OSVZ). These cells divide asymmetrically to self-renew and to generate neuron. IPs are multipolar cells in sub-ventricular zone (SVZ), which are the primary source of neuron generation. IP cells also have the capacity to self-renew. Once neurons are generated by RG or IP cells, they are migrated along the basal process of RG to the pial surface of the cortex and end up in the cortical plate (CP).
Schematic representation of Cortical Development and the Expansion of Neurons in Primates. CP - Cortical Plate; IZ - Intermediate Zone; OSVZ - Outer Sub-ventricular Zone; ISVZ - Inner Sub-ventricular Zone; SVZ - Sub-ventricular Zone; VZ - Ventricular Zone. vRG - ventricular Radial Glia; oRG - outer Radial Glia; IP - Intermediate Progenitors.
The evolution of human cortex is not only associated with the cognitive abilities but might also be linked to the increased susceptibility to certain neurological disorders like autism and schizophrenia. The number of oRG cells notably increased in number in humans and is postulated to be a strong determinant of cortical expansion in primates. Recently, several genetic differences have been identified between humans and non-human primates but the functional significance of these differences still need to be explored.