IPMB-PEM meeting schedule
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The latest schedule of the PEM journal club will be posted here. If you need to update the information of your presentation, please contact your PI or the people listed here.
Meeting Schdeule:
Date: 2024/01/08 Lab: Kuo Presenter: Sopio Tchabashvili
Host: Li-Kang Sung from Dr. Lai's Lab
Paper title/Talk title: Evolutionary classification of tumor- and root-inducing plasmids based on T-DNAs and virulence regions.
Paper link: https://www.sciencedirect.com/science/article/pii/S105579032200001X
Date: 2024/01/22 Lab: Wu Presenter: Yu-seng Huang
Host: Kai-Wen Chen
Paper title/Talk title: Functional divergence shaped the network architecture of plant immune receptors.
Paper link: https://www.biorxiv.org/content/10.1101/2023.12.12.571219v1
Date: 2024/02/05 Lab: Wu TY Presenter: Henry Eo
Host: Chibbhi Bhaska
Paper title/Talk title: Genome-resolved metatranscriptomics reveals conserved root colonization determinants in a synthetic microbiota
Paper link: https://www.nature.com/articles/s41467-023-43688-z
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/03/04 Lab: Chiou Presenter: Yu-Hsien Chang
Host:
Paper title/Talk title: Bacterial cell-size changes resulting from altering the relative expression of Min proteins
Paper link: https://www.nature.com/articles/s41467-023-41487-0
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/03/18 Lab: Lai Presenter: Li-Kang Sung
Host: Sopio Tchabashvili
Paper title/Talk title: Leaf microbiome dysbiosis triggered by T2SS-dependent enzyme secretion from opportunistic Xanthomonas pathogens
Paper link: https://www.nature.com/articles/s41564-023-01555-z
Webex meeting link https://docs.google.com/presentation/d/1q6uvLYYOGJ9h2qLmWa5PFonU1nGSLeIQ/edit?usp=sharing&ouid=118054606459530353360&rtpof=true&sd=true
Presentation file
https://docs.google.com/presentation/d/1q6uvLYYOGJ9h2qLmWa5PFonU1nGSLeIQ/edit?usp=sharing&ouid=118054606459530353360&rtpof=true&sd=true
Date: 2024/04/01 Lab: Ma KW Presenter: Ka-Wai Ma
Host: (Name of the host, usually from a lab distinct from the presenter )
Paper title/Talk title: Sugar transporters spatially organize microbiota colonization along the longitudinal root axis of Arabidopsis
Paper link: https://www.sciencedirect.com/science/article/pii/S193131282400057X?via%3Dihub
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file https://drive.google.com/file/d/1zNhORS-x8xQDNTpT0peIo2H7p7dRE5kz/view?usp=sharing
Date: 2024/04/15 Lab: Ku Presenter: Ni-Chiao Tsai
Host: Sopio Tchabashvili from Dr. Kuo's lab
Paper title/Talk title: Particle-attached bacteria act as gatekeepers in the decomposition of complex phytoplankton polysaccharides
Paper link: https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-024-01757-5
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/04/29 Lab: Ma LS Presenter: Dr. Evan John
Host: Rafika Amalia Annur, Research Assistant in Dr. Chih-Horng Kuo's lab
Paper title/Talk title: Identification of a negative-strand RNA virus with natural plant and fungal hosts
Paper link: https://www.pnas.org/doi/10.1073/pnas.2319582121
Date: 2024/05/13 Lab: Kuo Presenter: Dina Fitriana
Host: Florensia Ariani Damei from Dr. Ma's lab
Paper title/Talk title: Mutation in the Agrobacterium hisI gene enhances transient expression in pepper.
Paper link: https://doi.org/10.1016/j.hpj.2023.07.003
Date: 2024/05/27 Lab: Wu Presenter: Wen-Rong Hsiao
Host: Yu Wu from Dr Kuo's Lab
Paper title/Talk title: Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS repressor proteins to reprogram plant immunity and development
Paper link: https://doi.org/10.1073/pnas.2210300120
Date: 2024/06/24 Lab: Ku Presenter: Hsin-Tung Lai
Host: Shen-Chian Pei
Paper title/Talk title: (Master Thesis) Investigation of Large Microbial Eukaryotes in Taiwan using Single-Particle Genomics
Paper link: (Please provide the link to the journal website for people to download the paper )
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/07/08 Lab: Ma LS Presenter: Pin-Chih Chang
Host: Sin Sin Hsu
Paper title/Talk title: Master's thesis presentation "Investigating the PR-1La-dependent Signaling Pathway in Ustilago maydis" at 9.45 AM.
Date: 2024/07/22 Lab: Lai Presenter: Xuan Lai
Host: Yi-Feng Chen
Paper title/Talk title: Volatile methyl jasmonate from roots triggers host-beneficial soil microbiome biofilms
Paper link: https://www.nature.com/articles/s41589-023-01462-8
Webex meeting link
Presentation file https://drive.google.com/file/d/1K-jVV-NJkvJmEuKdJbUTEh8KCj6mpGYr/view?usp=sharing
Date: 2024/08/05 Lab: Kuo Presenter: Rafika Amalia Annur
Host: Wen-Rong Hsiao from Dr. Wu's Lab
Paper title/Talk title: Comparative genomic and transcriptome analyses of two Pectobacterium brasiliense strains revealed distinct virulence determinants and phenotypic features
Paper link: https://doi.org/10.3389/fmicb.2024.1362283
Date: 2024/08/19 Lab: Wu Presenter: Hung-Yu Wang
Host: Li-Kang Sung from Lai Lab
Paper title/Talk title: Shed the light on NRC structure: what can we learn from it
Paper link:
- NRC4 hexamer resistosome (Liu et al., 2024 Cell): https://www.cell.com/cell/fulltext/S0092-8674(24)00773-6
- resting NRC2 dimer and oligomer (Ma et al., 2024 Nature): https://www.nature.com/articles/s41586-024-07668-7
- NRC2 dimer (Selvaraj et al., 2023 bioRxiv): https://doi.org/10.1101/2023.12.17.572070
- NRC2 hexamer (Madhuprakash et al., 2024 bioRxiv): https://doi.org/10.1101/2024.06.18.599586
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/09/02 Lab: Chiou Presenter: Kuan-yu Lin
Host: (Name of the host, usually from a lab distinct from the presenter )
Paper title/Talk title: Eng2, a new player involved in feedback loop regulation of Cdc42 activity in fission yeast
Paper link: https://www.nature.com/articles/s41598-021-97311-6
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/09/16 Lab: Ma KW Presenter: Syukur
Host: Miguel
Paper title/Talk title: Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify
Paper link: https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.14843
Webex meeting link
Presentation file
Date: 2024/09/30 Lab: Lai Presenter: Mao-Sen Liu
Host: Kuan-yu Lin
Paper title/Talk title: Enhancing Agrobacterium-mediated Plant Transformation Efficiency through Improved Ternary Vector Systems and Auxotrophic Strains
Paper link: https://doi.org/10.3389/fpls.2024.1429353
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/10/14 Lab: Ku Presenter: Tzu-Haw Wang
Host: (Name of the host, usually from a lab distinct from the presenter )
Paper title/Talk title: Rhizobia–diatom symbiosis fixes missing nitrogen in the ocean
Paper link: https://www.nature.com/articles/s41586-024-07495-w
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/10/28 Lab: Ma LS Presenter: Neelima Chandrasekharan
Host: Sopio Tchabashvili
Paper title/Talk title: A pathogen effector co-opts a host RabGAP protein to remodel pathogen interface and subvert defense-related secretion
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2024/11/11 Lab: Kuo Presenter: Kenneth Joseph Bureros
Host: Ｗen-Chi Hu from Dr. Wu's lab
Paper title/Talk title: A pangenomic atlas reveals eco-evolutionary dynamics that shape type VI secretion systems in plant-pathogenic Ralstonia.
Paper link: https://doi.org/10.1128/mbio.00323-24
Date: 2024/11/25 Lab: Wu Presenter: Liang-Yu Hou
Host: Yu Wu
Paper title/Talk title: Altering cold-regulated gene expression decouples the salicylic acid–growth trade-off in Arabidopsis
Paper link: https://academic.oup.com/plcell/article/36/10/4293/7721303?login=true
Date: 2024/12/09 Lab: Lai Presenter: Teng-Kuei Huang
Host: Li-Kang Sung
Paper title/Talk title: Binary vector copy number engineering improves Agrobacterium-mediated transformation
Paper link: https://www.nature.com/articles/s41587-024-02462-2
Webex meeting link
Presentation file https://drive.google.com/file/d/1VgNvfqMGVUg81IOpMKdeSteGOJxnDdlf/view?usp=sharing
Date: 2024/12/23 Lab: Ku Presenter:
Host: (Name of the host, usually from a lab distinct from the presenter )
Paper title/Talk title: (Please paste the title of the paper or the title of your research talk here)
Paper link: (Please provide the link to the journal website for people to download the paper )
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
Date: 2025/01/06 Lab: Ma LS Presenter: Chau Minh Quang
Host: Nang Yee Mon Htoo
Paper title/Talk title: Plant PR1 rescues condensation of the plastid iron-sulfur protein by a fungal effector
Paper link: https://www.nature.com/articles/s41477-024-01811-y#Sec9
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
(Please keep this one as template)
Date: 2024/xx/xx Lab: Presenter:
Host: (Name of the host, usually from a lab distinct from the presenter )
Paper title/Talk title: (Please paste the title of the paper or the title of your research talk here)
Paper link: (Please provide the link to the journal website for people to download the paper )
Webex meeting link (If the meeting is through webex, please insert the link to the webex meeting as a hyperlink here and provide the password when necessary)
Presentation file (Please provide the link to your presentation file as a hyperlink after the meeting, but this is optional )
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