All Conference Sessions are being held in the Jacobs School of Medicine and Biomedical Sciences, 955 Main Street, Buffalo, NY, 14203. Please use the main entrance located at the corner of High St. & Main St. Your conference ID badge will allow access to the building and is required by security to be worn at all times during the meeting.
Morning and Afternoon coffee breaks will occur Tuesday-Friday outside the Active Learning Center, even where not noted on schedule.
Room 1110, Jacobs School of Medicine and Biomedical Sciences
Continental Breakfast
OBO core workshop (invitation only)
Lunch
OBO core workshop (invitation only)
Session on integration of Common Core Ontologies with BFO and OBO-Core
ICBO 2019 Registration, entry lobby, Jacobs School of Medicine and Biomedical Sciences
Continental Breakfast, outside Active Learning Center, Jacobs School of Medicine and Biomedical Sciences
Lunch
Outside Active Learning Center
Active Learning Center
Session Chair 4 – 5: William Duncan
Foundation for a realist ontology of cognitive processes
David Kasmier, David Limbaugh and Barry Smith
Eric Merrell, David Limbaugh, Alex Anderson and Barry Smith
David Limbaugh, David Kasmier, Werner Ceusters and Barry Smith
End of activities for the day
ICBO 2019 Registration, entry lobby, Jacobs School of Medicine and Biomedical Sciences
Continental Breakfast, outside Active Learning Center
Lunch
Outside Active Learning Center
Active Learning Center
Session Chair 4 – 5: James Overton
Melissa Clarkson and Steven Roggenkamp
Wordified Ontologies: Evaluating a Novel Paradigm for Ontology Editing
Aisha Blfgeh and Phillip Lord
Representing Causation: A Dispositional Perspective
Fumiaki Toyoshima
Networking Reception
All conference sessions will be in the Active Learning Center
ICBO 2019 Registration, entry lobby, Jacobs School of Medicine and Biomedical Sciences
Continental Breakfast, outside Active Learning Center
Opening remarks
Keynote Presentation, chair William Duncan
International Standard Ontology
Barry Smith, Julian Park Chair, Department of Philosophy, University at Buffalo
Coffee Break
Session Chair 10:30 – 12: William Hogan
Jean Noël Nikiema and Olivier Bodenreider
A classification of instructions in drug prescriptions and pharmacist documents
Adrien Barton, Paul Fabry and Jean-Francois Ethier
Chinese Ontology Construction and Application for Drug Adverse Reaction
Xin Lin, Jinjing Guo and Huiling Ren
TXPO: A toxic process ontology for better understanding of drug-induced liver injury
Yuki Yamagata, Yoshinobu Igarashi, Noriyuki Nakatsu and Hiroshi Yamada
Lunch
Outside Active Learning Center
Session Chair 1 – 2:10: Oliver He
Ontology of Physics for Biology — a companion ontology to Basic Formal Ontology
Daniel Cook, John Gennari and Maxwell Neal
A Realism-based Approach to Representing Symbiotic Interactions
Matthew Diller, Evan Johnson, Amanda Hicks and William Hogan
Meng Liu, Hong-Yu Ou and Yongqun He
Coffee Break
Session Chair 2:30 – 4: Lynn Schriml
Yongqun He, Edison Ong, Jennifer Schaub, Frederick Dowd, John F. O’toole, Anastasios Siapos, Christian Reich, Sarah Seager, Ling Wan, Hong Yu, Jie Zheng, Christian Stoeckert, Xiaolin Yang, Sheng Yang, Becky Steck, Christopher Park, Laura Barisoni, Matthias Kretzler, Jonathan Himmelfarb, Ravi Iyengar and Sean Mooney
The Hypertension Ontology: Coordinating clinical data with context-sensitive hypertension criteria
Amanda Hicks, Mark Miller, Danielle Mowery and Christian Stoeckert
Ling Wan, Edison Ong and Yongqun He
Poster presentations & Software demonstrations
Leave for dinner by hired bus or private transport
Dinner at Marcy Casino, Delaware Park (included in Conference Fee)
All conference sessions will be in the Active Learning Center
Continental Breakfast, outside Active Learning Center
Keynote Presentation, chair Alexander Diehl
Putting principles into practice: OBO ontologies and applications in immunology
Bjoern Peters, Professor, La Jolla Institute for Immunology
Break
Session Chair 10:20 – 12:10: Jonathan Bona
Ontology as Product-Service System: A Study of GO, BFO and DOLCE
Barry Smith
Building a Shared Ontology Use Patterns Repository
Jonathan Bona, Joseph Utecht, Sarah Bost, Corey Hayes and Mathias Brochhausen
Mark Miller and Christian Stoeckert
Roles and Their Siblings in Basic Formal Ontology
Fumiaki Toyoshima
Lunch
Outside Active Learning Center
The Future of SNOMED CT
Jim Case, SNOMED International
Panel discussion, Opportunities for collaboration between the OBO Foundry community and SNOMED
Panel: Jim Case, Chris Stoeckert, Peter Elkin, Barry Smith
Moderator: Olivier Bodenreider
Break
Session Chair 2:50 – 4: Alexander Diehl
OBO-Core Update
Foundations for a Realism-based Drug Repurposing Ontology
James Schuler, William Mangione, Ram Samudrala and Werner Ceusters
Early steps of an Ontology for Magnetic Resonance Imaging: MRIO
Lucas Serra, Michael Dwyer, William Duncan and Alexander D. Diehl
Closing remarks
End of ICBO 2019