Teaching

NOTE: The course material, powerpoint presentations or any other help regarding the following taught courses can be provided on request.

Graduate Courses

CSE632 - Advanced Bioinformatics

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIK Institute) [Spring 2020] 1 time.

Main contents:

Algorithms for problems such as

Patterns in Computer Science - String Matching Algorithms,
Alignment,
Phylogeny,
An introduction to Markov chains, hidden Markov models and applications in bioinformatics.

DD2450 - Algorithmic Bioinformatics (Assist)

At School of Computer Science and Communication (CSC), Kungliga Tekniska Högskolan (KTH) [Fall 2012-Fall 2015] 4 times, as teaching assistant.

Main contents:

Algorithms for problems such as

Alignment,
Phylogeny,
Reversal sorting,
An introduction to Markov chains, hidden Markov models and applications in bioinformatics.

Undergraduate Courses

Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) - Fall 2018 to present

CS474 - Bioinformatics

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) [Fall 2019] 1 time.

Main contents:

Algorithms for problems such as

Alignment,
Phylogeny,
Reversal sorting,
An introduction to Markov chains, hidden Markov models and applications in bioinformatics.

CS231 - Discrete Mathematics

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) [Fall 2019 and Fall 2018] 2 times.

Main contents:

Predicate Logic
Analysis of algorithms
Integers and algorithms with special emphasis on cryptography
Combinatorics.
Graph theory

CE451 - Applied Artificial Intelligence

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) [Spring 2019] 1 time.

Main contents:

Overview and Basics of Artificial Intelligence.
Game Heuristics.
Solving optimization problems.
Unsupervised Learning.
Supervised Learning.
Probabilistic-based learning (Markov chains and Hidden Markov models).
Fuzzy logic.

CS323 - Object Oriented Analysis and Design

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) [Spring 2019] 1 time.

Main contents:

Introduction to java

o Classes

o Inheritance

o Polymorphism

Object Oriented Analysis and Design

o Object Oriented Design Paradigm

o UML (Use Case Diagrams, Class Diagrams, Sequence Diagrams)

o Design Patterns

CS101 - Introduction to Computing

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) [Fall 2018 and Fall 2019] 2 times.

Main contents:

Basics of Computer – Software and Hardware

Computers and their applications, Types of Computers, History of Computers, Hardware and Software – Introduction and Differences, Peripheral Devices, Data Representation and Conversion – Binary and Decimal Number Systems, ASCII/Unicode Representation, Microprocessors, Primary and Secondary Memory, Storage Devices, Networks, and Types of Networks.

Basics of computer programming

Algorithms, Flowcharts, Pseudocode, Assignment Operators, If Selection Statement, If … Else Selection Statement, Nested Control Structures, Switch Statements, Repetition Via Loops, Lists With Special Emphasis on Arrays, Passing Arrays to Functions, Searching in Arrays, Pointers, Library Functions and Header Files.

CS352 - Introduction to soft computing

At Faculty of Computer Science and Engineering (FCSE), Ghulam Ishaq Khan Institute of Engineering Sciences and Technology (GIKI) [Spring 2020] 1 time.

Main contents:

Introduction to AI

State Space and Search
Game Trees
Optimization Strategies
Probabilistic Models for Classification
Fuzzy Logic vs. Crisp Logic (aka Predicate Logic)

COMSATS Institute of Information Technology (CIIT) - Fall 2009 to Spring 2010 (2 semesters)

BIO310 - Introduction to Bioinformatics

Taught the course for two semesters to third year undergraduate students of Bioinformatics and Biosciences.

BIO400 - Bioinformatics Scripting

Taught the course for two semesters to fourth year undergraduate students of Bioinformatics.

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