1. Muñoz-Rojas J. and J. Caballero-Mellado. 2003. Population dynamics of Gluconacetobacter diazotrophicus in sugarcane cultivars and its effect on plant growth. Microbial Ecology 46(4): 454-464. ISSN: 0095-3628.
2. Muñoz-Rojas J., L. E. Fuentes-Ramírez, and J. Caballero-Mellado. 2005. Antagonism among Gluconacetobacter diazotrophicus strains in culture media and in association with sugarcane plants. FEMS Microbiology Ecology 54(1): 57-66. ISSN: 0168-6496.
3. Muñoz-Rojas J., P. Bernal, E. Duque, P. Godoy, A. Segura and J. L. Ramos. 2006. Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying. Applied and Environmental Microbiology 72(1): 472-477. ISSN: 0099-2240.
4. Duque E., J. J. Rodríguez-Herva, J. de la Torre, P. Domínguez-Cuevas, J. Muñoz-Rojas and J. L. Ramos. 2007. The RpoT regulon of P. putida DOT-T1E and its role in stress endurance against solvents. Journal of Bacteriology 189(1): 207-219. ISSN: 0021-9193.
5. Bernal, P., J. Muñoz-Rojas, A. Hurtado, J. L. Ramos and A. Segura. 2007. A Pseudomonas putida cardiolipin synthesis mutant exhibits increased sensitivity to drugs related to transport functionality. Environmental Microbiology 9(5): 1135-1145. ISSN: 1462-2912.
http://onlinelibrary.wiley.com/doi/10.1111/j.1462-2920.2006.01236.x/abstract
6. Böltner, D., P. Godoy, J. Muñoz-Rojas, E. Duque, S. Moreno-Morillas, L. Sánchez and J. L. Ramos. 2008. Rhizoremediation of lindane by root-colonizing Sphingomonas. Microbial Biotechnology 1(1): 87-93. ISSN: 1751-7915.
http://onlinelibrary.wiley.com/doi/10.1111/j.1751-7915.2007.00004.x/full
7. Pérez-y-Terrón R., Villegas M. C., Cuellar A., Muñoz-Rojas J., Castañeda-Lucio M., Hernández-Lucas I., Bustillos-Cristales R., Bautista-Sosa L., Munive J. A., Caicedo-Rivas R., and Fuentes-Ramírez L. E. 2009. Detection of Pantoea ananatis, causal agent of leaf spot disease of maize, in Mexico. Australasian Plant Disease Notes 4(1):96-99. eISSN: 1833-928X.
8. Marín-Cevada V., Caballero-Mellado J., Bustillos-Cristales R., Muñoz-Rojas J., Mascarúa-Esparza M. A., Castañeda-Lucio M., López-Reyes L., Martínez-Aguilar L., and Fuentes-Ramírez L. E. 2010. Tatumella ptyseos, an unrevealed causative agent of Pink Disease in pineapple. Journal of Phytopathology 158(2): 93-99. ISSN: 0931-1785.
http://onlinelibrary.wiley.com/doi/10.1111/j.1439-0434.2009.01575.x/abstract
9. Munguía-Pérez R., Díaz-Cabrera E., Martínez-Montiel N., Muñoz-Rojas J., and Martínez-Contreras R. 2011. Fungal diversity in soil samples from a Mexican region with endemic dermatomycoses. Micologia Aplicada International 23(1): 11-19. ISSN: 1534-2581.
10. Morales-García Y. E., Juárez-Hernández D., Aragón-Hernández C., Mascarua-Esparza M. A., Bustillos-Cristales M. R., Fuentes-Ramírez L. E., Martínez-Contreras R. D., and Muñoz-Rojas J*. 2011. Growth response of maize plantlets inoculated with Enterobacter sp. as a model for alternative agriculture. Revista Argentina de Microbiología 43(4): 287-293. ISSN: 0325-7541.
11. López-Reyes L., Hernández-Espinosa M. A., Ruiz-Careaga J., Carcaño-Montiel M. G., Medina-de-la-Rosa G., Portillo-Reyes R., and Muñoz-Rojas J. 2012. Adsorption of plant and bacteria carboxylic acids in agricultural soil. Terra Latinoamericana 30(3): 261-270. ISSN: 0187-5779.
12. Segura A., Molina L., Fillet S., Krell T., Bernal P., Muñoz-Rojas J., and Ramos J.-L. 2012. Solvent tolerance in Gram-negative bacteria. Current Opinion in Biotechnology 23(1): 415-421. ISSN: 0958-1669.
http://www.sciencedirect.com/science/article/pii/S0958166911007269
13. Marín-Cevada V., Muñoz-Rojas J., Caballero-Mellado J., Mascarúa-Esparza M. A., Castañeda-Lucio M., Carreño-López R., Estrada de los Santos P., and Fuentes-Ramírez L. E. 2012. Antagonistic interactions among bacteria inhabiting pineapple. Applied Soil Ecology 61(1): 230-235. ISSN: 0929-1393.
http://www.sciencedirect.com/science/article/pii/S0929139311003192
14. Corral-Lugo A., Morales-García Y. E., Pazos-Rojas L. A., Ramírez-Valverde A., Martínez-Contreras R. D. and Muñoz-Rojas J*. 2012. Quantification of cultivable bacteria by the “Massive Stamping Drop Plate” method. Revista Colombiana de Biotecnología. XIV(2): 173-182. ISSN: 0123-3475.
http://www.scielo.org.co/scielo.php?script=sci_arttext&pid=S0123-34752012000200016
15. Pérez-y-Terrón R., Muñoz-Rojas J., Jesús Rafael Herrera-Huesca. 2013. Flora bacteriana asociada a cultivos de jitomate (Lycopersicon esculentum, Mill). Revista Iberoamericana para la Investigación y el Desarrollo Educativo 10:1-28. Microbiología. ISSN: 2007-7467.
16. Juárez-Hernández D., Krell T., Corral-Lugo A., Hernández-Tenorio A. L., Morales-García Y. E., Bustillos-Cristales R., Muñoz-Rojas J*. 2014. Chemotaxis studies of Pseudomonas putida KT2440 and mutants in chemoreceptors for efficient colonization of tomato plants. Journal of Chemical, Biological and Physical Sciences, Special Issue Section B: Environmental Biotechnology 4(5):130. E-ISSN:2249-1929 7.
17. Pérez-y-Terrón R., González-Montfort T. S., Muñoz-Rojas J. 2014. Antagonismo microbiano asociado a cepas bacterianas provenientes de jitomate (Lycopersicum esculentum Mill) y maíz (Zea mays). Revista Iberoamericana de Ciencias 1(3):53-60. ISSN: 2334-2501.
18. Reyes Darías J. A., García V., Rico-Jiménez M., Corral-Lugo A., Lesouhaitier O., Juárez-Hernández D., Yang Y., Bi S., Feuilloley M., Muñoz-Rojas J., Sourjik V., Krell T. 2015. Specific gamma-aminobutyrate chemotaxis in pseudomonads with different lifestyle. Molecular Microbiology 97(3):488-501. Online ISSN: 1365-2958.
http://onlinelibrary.wiley.com/doi/10.1111/mmi.13045/abstract
19. Castañeda-Antonio D., Rivera A., Islas-Rodríguez E., Portillo-Reyes R., Muñoz-Rojas J., Hernández-Aldana F., Martínez-Carrera D. 2015. Chemical properties and bactericidal activity of Rosmarinus officinalis and Origanum x majoricum. ARPN Journal of Agricultural and Biological Science 10(10):390-393. ISSN: 1990-6145.
http://www.arpnjournals.com/jabs/research_papers/rp_2015/jabs_1015_756.pd2f
20. Rodríguez-Andrade O., Fuentes-Ramírez L. E., Morales-García Y. E., Molina-Romero D., Bustillos-Cristales M. R., Martínez-Contreras R. D., and Muñoz-Rojas J*. 2015. The decrease of Gluconacetobacter diazotrophicus population in sugarcane, after nitrogen fertilization, is related to plant physiology in split root experiments. Revista Argentina de Microbiología 47(4):335-343. ISNN: 0325-7541.
http://www.sciencedirect.com/science/article/pii/S032575411500125X
21. Morales-García Y. E., Hernández-Canseco J., Ramos-Castillo G., Pérez-y-Terrón R., Muñoz-Rojas J*. 2016. Cuantificación de Penicillium sp. por el método de goteo en placa. Revista Iberoamericana de Ciencias 3(2):12-19. ISSN: 2334-2501.
22. Pazos-Rojas L. A., Marín-Cevada V., Morales-García Y. E., Baez A., Villalobos-López M. A., Pérez-Santos M., Muñoz-Rojas J*. 2016. Uso de microorganismos benéficos para reducir los daños causados por la revolución verde. Revista Iberoamericana de Ciencias 3(7):72-85. ISSN: 2334-2501.
23. Baez-Rogelio A., Morales-García Y. E., Quintero-Hernández V., Muñoz-Rojas J*. 2017. Next generation of microbial inoculants for agriculture and bioremediation. Microbial Biotechnology 10(1): 19-21. Online ISSN: 1751-7915.
http://onlinelibrary.wiley.com/doi/10.1111/1751-7915.12448/full
24. Molina-Romero D., Morales-García Y. E., Hernández-Tenorio A. L., Castañeda-Lucio M., Netzahuatl-Muñoz A. R., Muñoz-Rojas J*. 2017. Pseudomonas putida estimula el crecimiento de maíz en función de la temperatura. Revista Iberoamericana de Ciencias 4(1): 80-88. ISSN: 2334-2501.
25. Muñoz-Rojas J*. 2017. Importance of produce economic compounds to combat cancer. Microbial Biotechnology. 10(4):683-684. Online ISSN: 1751-7915.
http://onlinelibrary.wiley.com/doi/10.1111/1751-7915.12491/full
26. Anaya-Ruiz M., Pérez-Santos M., Muñoz-Rojas J. 2017. Mapping publications and patents in breast cancer immunotheraphy. Acta Scientific Cancer Biology 2(1):14-18.
27. Castañeda-Antonio M. D., Ibarra-Cantú M. G., Rivera-Tapia J. A., Portillo-Reyes R., Muñoz-Rojas J., Munguía-Pérez R., Hernández-Aldana F. 2017. Extracto de Costus spicatus y su aplicación como inhibidor de microorganismos. Revista Iberoamericana de Ciencias 4(4):1-6. ISSN: 2334-2501.
28. Bustillos-Cristales M. R., Corona-Gutiérrez I., Castañeda-Lucio M., Águila-Zempoaltecatl C., Seynos-García E., Hernández-Lucas I., Muñoz-Rojas J., Medina-Aparicio L., Fuentes-Ramírez L.E. 2017. Culturable facultative methylotrophic bacteria from the cactus Neobuxbaumia macrocephala possess the locus xoxF and consume metanol in the presence of Ce3+ and Ca2+. Microbes and Environments 32(3):244-251. ISNN: 1347-4405.
https://www.jstage.jst.go.jp/article/jsme2/32/3/32_ME17070/_pdf/-char/en
29. Molina-Romero D., Baez A., Quintero-Hernández V., Castañeda-Lucio M., Fuentes-Ramírez L. E., Bustillos-Cristales M. R., Rodríguez-Andrade O., Morales-García Y. E., Munive A., Muñoz-Rojas J*. 2017. Compatible bacterial mixture, tolerant to desiccation, improves maize plant growth. PLoS ONE 12(11): e0187913. eISSN: 1932-6203.
30. Pazos-Rojas L. A., Rodríguez-Andrade O., Muñoz-Arenas L. C., Morales-García Y. E., Corral-Lugo A., Quintero-Hernández V., Baez A., Molina-Romero D., Muñoz-Rojas J*. 2018. Desiccation-tolerant rhizobacteria maintain their plant growth promoting-capability after experiencing extreme water stress. SciFed Journal of Applied Microbiology 1(1):1-13. ISSN: En trámite. DOI: 10.23959/sfjam-100005
31. Benítez-de la Torre A., Montejo-Sierra I. L., Morales-García Y. E., Muñoz-Rojas J., Díaz-Ruíz R., López P. A. 2018. Addition of energy sources and inoculants in the elaboration of cassava-based yogurt. Pastos y Forrajes 41(1):29-32. ISSN: 2078-8452.
32. Moreno-Valencia F. D., Plascencia-Espinosa M. A., Muñoz-Rojas J*. 2018. Isolation and screening of plant growth promoting bacteria for their application in forest species. Mexican Journal of Biotechnology 3(3):36-53. ISSN:2448-6590.
https://docs.wixstatic.com/ugd/38ce56_f8f08db6d9b04c11973675fa2c5ab105.pdf
33. Castañeda-Antonio D., Rivera-Tapia A., Choy-Flores E., Munguía-Pérez R., Portillo-Reyes R., Muñoz-Rojas J. 2018. Actividad antimicrobiana del aceite de naranja residual. UNED Research Journal 10(2):469-474. ISSN online:1659-441X.
http://investiga.uned.ac.cr/revistas/index.php/cuadernos/article/view/2175
34. Seynos-García E., Castañeda-Lucio M., Muñoz-Rojas J., López-Pliego L., Villalobos M., Bustillos-Cristales R., Fuentes-Ramírez L. E*. 2019. Loci identification of a N-acyl homoserine lactone type quorum sensing system and a new LysRtype transcriptional regulator associated with antimicrobial activity and swarming in Burkholderia gladioli UAPS07070. Open Life Sci. 2019; 14: 165–178. ISSN: 2391-5412.
35. Pazos-Rojas L. A., Muñoz-Arenas L. C., Rodríguez-Andrade O., López-Cruz L. E., López-Ortega O., Lopes-Olivares F., Luna-Suarez S., Baez A., Morales-García Y. E., Quintero-Hernández V., Villalobos-López M. A., De la Torre J., Muñoz-Rojas J*. 2019. Desiccation-induced viable but nonculturable state in Pseudomonas putida KT2440, a survival strategy. PLoS ONE 14(7): e0219554. eISSN: 1932-6203
36. Ramírez V., Baez A., López P., Bustillos R., Villalobos M. A., Carreño R., Contreras J. L., Muñoz-Rojas J., Fuentes L. E., Martínez J. and Munive J. A*. 2019. Chromium hyper-tolerant Bacillus sp. MH778713 assists phytoremediation of heavy metals by mesquite trees (Prosopis laevigata). Front. Microbiol. 10:1833. Electronic ISSN: 1664-302X.
37. Rodríguez-Andrade O., Corral-Lugo A., Morales-García Y. E., Quintero-Hernández V., Rivera-Urbalejo A. P., Molina-Romero D., Martínez-Contreras R. D., Bernal P., Muñoz-Rojas J*. 2019. Identification of Klebsiella variicola T29A genes involved in tolerance to desiccation. The Open Microbiology Journal 13:256-267. ISSN: 1874-2858.
38. Cesa-Luna C., Muñoz-Rojas J., Saab-Rincon G., Baez A., Morales-García Y. E., Juárez-González V. R.*, Quintero-Hernández V*. 2019. Structural characterization of scorpion peptides and their bactericidal activity against clinical isolates of multidrug-resistant bacteria. PLoS ONE 14(11): e0222438. eISSN: 1932-6203
39. Cesa-Luna C., Baez A., Quintero-Hernández V., De la Cruz-Enríquez J., Castañeda-Antonio M. D., Muñoz-Rojas J*. 2020. The importance of antimicrobial compounds produced by beneficial bacteria on the biocontrol of phytopathogens. Acta Biol. Colomb. (2020); 25(1): 140-154. ISSN: 1900-1649.
DOI: http://dx.doi.org/10.15446/abc.v25n1.76867
https://revistas.unal.edu.co/index.php/actabiol/article/view/76867/pdf
40. Rocha G., Le Queré A., Medina A., Cuéllar A., Contreras J.-L., Carreño R., Bustillos R., Muñoz-Rojas J., Villegas M. C., Chaintreuil C., Dreyfus B., Munive J.-A.*. 2020. Diversity and phenotypic analyses of salt- and heat-tolerant wild bean Phaseolus filiformis rhizobia native of a sand beach in Baja California and description of Ensifer aridi sp. nov. Arch. Microbiol. 202(2): 309-322 Print ISSN: 0302-8933. Online ISSN: 1432-072X.
41. Ramírez V., Munive J.-A., Cortés L., Muñoz-Rojas J., Portillo R., Baez A*. 2020. Long-Chain Hydrocarbons (C21, C24, and C31) Released by Bacillus sp. MH778713 Break Dormancy of Mesquite Seeds Subjected to Chromium Stress. Front. Microbiol. 10:741. Electronic ISSN: 1664-302X.