Research Projects
Research Projects
The primary purpose of the SCIARM laboratory is to advance basic medical research in the Philippines by constructing novel disease models which can be used in studying diseases prevalent in the country. As of 2023, the SCIARM Laboratory have been implementing research projects all harmonized to generate advanced in vitro disease models in the form of Filipino-derived induced pluripotent stem cells (iPSCs), transgenic cell lines and 3D culture models, and in vivo disease mouse models.
ONGOING PROJECTS
Phil-DIAMOND Project 2
Project Title: Development of HIV Disease Models and in vitro Investigation of HIV-related Neurocognitive and Metabolic Complications
Implementation period: February 2021 - February 2024
Funding Agency: Department of Science and Technology (DOST)
Monitoring Agency: DOST Philippine Council for Health Research and Development (DOST-PCHRD)
Cooperating Agencies:
College of Public Health, UP Manila
College of Arts and Sciences, UP Manila
College of Arts and Sciences, UP Los Baños
UP Philippine General Hospital
Iligan Institute of Technology, Mindanao State University
PRIMARY OBJECTIVE: Develop in vitro disease models for the investigation of cellular mechanisms driving HIV-related metabolic and neurocognitive disorders and to generate preclinical data for candidate drugs and natural products targeting HIV-related biomarkers
MAIN OUTPUTS:
Filipino-based cellular disease models: The world’s first ever Filipino-derived induced pluripotent stem cells (iPSCs)
Filipino iPSC-derived neuronal and endothelial cells
Transgenic cellular disease models: Immune cell lines overexpressing HIV-related biomarkers
Preclinical data for validation of biomarkers from Project 1 (CPH-UPM)
Preclinical data for drugs, natural products and nutriceutical components from Project 3 (CS-UPM)
Establish a disease modeling facility at MSU-IIT
IMMUNE Project 2
Project Title: IMMUNE-MODELS: Approaching Disease via Development and Utilization of Cellular Technologies
Implementation period: April 2023 - April 2026
Funding Agency: Department of Science and Technology (DOST)
Monitoring Agency: DOST Philippine Council for Health Research and Development (DOST-PCHRD)
Cooperating Agencies:
Lung Center of the Philippines (LCP)
College of Medicine, UP Manila
National Institutes of Health (NIH), UP Manila
De La Salle Medical and Health Sciences Institute
Philippine Normal University
Department of Biochemistry, University of Sto. Tomas
TB-RePORT International - Philippines
Iligan Institute of Technology, Mindanao State University
PRIMARY OBJECTIVE: Utilize advanced human cellular disease models to investigate the development of severe inflammatory symptoms and chronic post-infection lung complications of Filipino tuberculosis patients.
MAIN OUTPUTS:
Biobank of Filipino disease models (Filipino iPSC lines) for future use in basic research
Filipino iPSC-derived lung epithelial cells, monocytes and pulmonary fibroblasts
3D disease models: Air-liquid interface (ALI) cellular models for studying immune cell-lung interactions during complications of chronic tuberculosis
In vitro mechanistic data supporting transcriptomic and genomic studies of Project 1-Omics (LCP, NIH-UPM)
Pre-clinical data for immunotherapeutic strategies developed by Project 3-Biologics (CM-UPM, UST, De La Salle, PNU)
DeLEPTO Project 2
Project Title: In vitro Disease Modeling of Plasma-Mediated and Genotype-Associated Mechanisms of Severe Leptospirosis
Implementation period: January 2024 - January 2027
Funding Agency: Department of Science and Technology (DOST)
Monitoring Agency: DOST Philippine Council for Health Research and Development (DOST-PCHRD)
Cooperating Agencies:
National Kidney and Transplant Institute (NKTI)
College of Medicine, UP Manila
College of Public Health, UP Manila
College of Science, De La Salle University Manila
Iligan Institute of Technology, Mindanao State University
PRIMARY OBJECTIVES: (1) Generate in vitro disease models for the investigation of plasma-mediated molecular processes involved in the development of severe leptospirosis-induced complications such as pulmonary bleeding and kidney tissue rupture; (2) Identify useful biomarkers in patient cells that can be used for better prognosis, and eventually intervention to avoid mortality-causing complications; (3) Identify genotypes of interest that can contribute to the patient’s susceptibility and treatment response to leptospirosis induced complications.
MAIN OUTPUTS:
Biobank of Filipino disease models (Filipino iPSC lines) for future use in basic research
Filipino iPSC-derived endothelial cells and kidney cells
Co-culture disease models: Air-liquid interface (ALI) cellular models for studying immune cell-lung interactions during complications of chronic tuberculosis
In vitro mechanistic data supporting the clinical data of Project 1 (NKTI) and the validation of candidate prognostic markers for the development of microfluidic digital droplet PCR technology by Project 4 (De La Salle)
Pre-clinical data for immunotherapeutic strategies developed by Project 3 (CPH-UPM)
COMPLETED PROJECTS
PCARI-AMI
Joint Project for Disease Modelling and Developing Novel Therapeutics: Initial Focus on Acute Myocardial Infarction, and Blood Calibration (CHED-PCARI IHITM 2018-033)
Implementation period: July 2021 - September 2023
Funding Agency: Department of Science and Technology (DOST)
Monitoring Agency: DOST Philippine Council for Health Research and Development (DOST-PCHRD)
Cooperating Agencies:
Department of Bioengineering, University of California Berkeley
National Institutes of Health (NIH), UP Manila
PRIMARY OBJECTIVES: (1) To develop in vivo preclinical model for well-controlled screening for novel therapeutics that improve resistance to AMI and attenuate fibrosis during heart healing through blood apheresis; (2) To evaluate the effects of TPE and blood apheresis on the efficiency of regeneration of the heart.
MAIN OUTPUTS:
Establishment of bio-imaging core facility at the Institute of Biology, UP Diliman
Enhancement of experimental mice facility at NIH-UP Manila
Generation of AMI mouse disease models through artificial simulation of a heart attack
Application of mouse mini-apheresis technology from the University of California Berkeley
Optimized TPE/apheresis protocol for enhanced resistance to cardio-vascular failure and improved recovery from AMI
Preclinical data for initiating Phase I and II clinical trials for the safety and use of TPE/Apheresis for treating heart diseases