3D Cell Culture

A photo of breast cancer-derived organoid stained with calcein AM (green), ethidium homodimer (red), and Hoechst (blue). Image c/o Regina Joyce E. Ferrer, Science Research Specialist, Regen Lab.

What is 3D cell culture?

3D cell culture refers to a method of growing cells in three dimensions to mimic the natural environment of cells in tissues and organs more accurately. These techniques involve growing cells within a three-dimensional matrix or scaffold that provides structural support, allowing cells to interact with their surroundings in a manner more similar to their natural environment.

Advantages of 3D culture

Image c/o  Allen Joy Corachea, Science Research Specialist, Regen Lab

Types of 3D culture

Scaffold-based

Cells are embedded within a three-dimensional scaffold made of natural or synthetic materials, such as hydrogels, collagen, or extracellular matrix components. The scaffold provides physical support and a framework for cell growth. A common example of scaffold-based 3D culture system is the patient-derived organoids. 


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Scaffold-free

Cells are grown in a liquid medium without attachment to a solid surface. Aggregates or spheroids of cells can form, allowing interactions and communication between cells.

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Organ-on-a-chip systems

These are more advanced 3D cell culture models that aim to replicate the structure and function of specific organs or tissues. They involve integrating multiple cell types in a microfluidic chip that mimics the physiological conditions of the target organ.


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This study was supported in part by a research grant from the Department of Science and Technology - Philippine Council for Health Research and Development (BRCA).