Physician-Scientist
Training Program
Physician-Scientist
Training Program
Resident; future Gastroenterology Fellow
B.S., Biology, Society, and Environment — University of Minnesota, Twin Cities
M.D. — University of Minnesota, Twin Cities
TBD
Burger PB, Hu X, Balabin I, Muller M, Stanley M, Joubert F, Kaiser TM. FEP Augmentation as a Means to Solve Data Paucity Problems for Machine Learning in Chemical Biology. J Chem Inf Model. 2024 Apr 23. doi: 10.1021/acs.jcim.4c00071. Epub ahead of print. PMID: 38651738.
El-Awamry A, Zheng F, Kaiser T, Khaliel M. Harmonic FMCW Radar System: Passive Tag Detection and Precise Ranging Estimation. Sensors (Basel). 2024 Apr 15;24(8):2541. doi: 10.3390/s24082541. PMID: 38676158; PMCID: PMC11054317.
Boatman S, Kaiser T, Nalluri-Butz H, Khan MH, Dietz M, Kohn J, Johnson AJ, Gaertner WB, Staley C, Jahansouz C. 2023. Diet-induced shifts in the gut microbiota influence anastomotic healing in a murine model of colonic surgery. Gut Microbes 5(2):2283147.
Gates TJ, Yuan C, Shetty M, Kaiser T, Nelson AC, Chauhan A, Starr TK, Staley C, Subramanian S. 2023. Fecal Microbiota Restoration Modulates the Microbiome in Inflammation-Driven Colorectal Cancer. Cancers (Basel). 15(8):2260.
Rashidi A, Ebadi M, Rehman TU, Elhusseini H, Halaweish H, Kaiser T, Holtan SG, Khoruts A, Weisdorf DJ, Staley C. 2022. Compilation of longitudinal gut microbiome, serum metabolome, and clinical data in acute myeloid leukemia.
Sci. Data 9(1):468.
Saqr A, Carlson B, Staley C, Rashidi A, Al-Kofahi M, Kaiser T, Holtan S, MacMillan M, Young JA, Jurdi NE, Weisdorf D, Khoruts A, Jacobson PA. 2022. Reduced Enterohepatic Recirculation of Mycophenolate and Lower Blood Concentrations Are Associated with the Stool Bacterial Microbiome after Hematopoietic Cell Transplantation. Transplant Cell Ther. 28(7):372.e1-372.e9.
Rashidi, A., Peled, J., Ebadi, M., Rehman, T., Elhusseini, H., Marcello, L., Halaweish, H., Kaiser, T., Holtan, S., Khoruts, A., Weisdorf, D., Staley, C..2022. Protective effect of intestinal blautia against neutropenic fever in allogeneic transplant patients. Clin. Infect. Dis. 75(11):1912-1920.
Kaiser, T., & Jahansouz, C., & Staley, C. 2022. Network-based approaches for the investigation of microbial community structure and function using metagenomics-based data. Future Microbiol. 17(1): 621-631.
Rashidi A, Ebadi M, Rehman TU, Elhusseini H, Halaweish HF, Kaiser T, Holtan SG, Khoruts A, Weisdorf DJ, Staley C. 2022. Lasting shift in the gut microbiota in patients with acute myeloid leukemia. Blood Adv. 6(11):3451-3457.
Rashidi A, Ebadi M, Rehman TU, Elhusseini H, Nalluri H, Kaiser T, Ramamoorthy S, Holtan SG, Khoruts A, Weisdorf DJ, Staley C. 2021. Altered microbiota-host metabolic cross talk preceding neutropenic fever in patients with acute leukemia. Blood Adv. 5(20):3937-3950.
Zhu Z, Kaiser T, Staley C. 2021. Antibiotic Conditioning and Single Gavage Allows Stable Engraftment of Human Microbiota in Mice. Methods Mol. Biol. 2327:281-291.
Rashidi A, Ebadi M, Rehman TU, Elhusseini H, Nalluri H, Kaiser T, Holtan SG, Khoruts A, Weisdorf DJ, Staley C. 2021. Effect of COVID-19 precautions on the gut microbiota and nosocomial infections. Gut Microbes 13(1):1-10.
Kaiser T., & Nalluri H., & Zhu Z., & Staley C. 2021. Donor Microbiota Composition and Housing Affect Recapitulation of Obese Phenotypes in a Human Microbiota-Associated Murine Model. Front. Cell. Infection Microbiol. 11(614218)
Rashidi, A., Kaiser, T., Ebadi, M., Holtan, S., Ur Rehman, T., Weisdorf, D., Khoruts, A., Staley, C. 2020. Circulating bacterial DNA and neutropenic fever during anti-leukaemia chemotherapy. Br. J. Haematol. 191(2): e55-e58.
Nicol, M., Eneh, P., Nakalega, R., Kaiser, T., Kabwigu, S., Isingel, E., Beksinska, M., Sykes, C., Fowler, M., Brown, T., Staley, C., Kiweewa Matovu, F. 2020. Depot Medroxyprogesterone Acetate and the Vaginal Microbiome as Modifiers of Tenofovir Diphosphate and Lamivudine Triphosphate Concentrations in the Female Genital Tract of Ugandan Women: Implications for Tenofovir Disoproxil Fumarate/Lamivudine in Preexp. Clinical Infectious Diseases 70(8): 1717-1724.
Rashidi A., & Kaiser T., & Holtan S., & Weisdorf D., & Khoruts A., & Staley C. 2018. Pre-transplant recovery of microbiome diversity without recovery of the original microbiome. Bone Marrow Transplant. 54(1): 1115-1117.
Ahmed, W., Staley, C., Kaiser, T., Sadowsky, M., Kozak, S., Beale, D., Simpson, S. 2018. Decay of sewage-associated bacterial communities in fresh and marine environmental waters and sediment. Appl .Microbiol .Biotechnol. 102(1): 7159-7170.
Tomasek, A., Staley, C., Wang, P., Kaiser, T., Lurndahl, N., Kozarek, J., Hondzo, M., Sadowsky, M. 2017. Increased Denitrification Rates Associated with Shifts in Prokaryotic Community Composition Caused by Varying Hydrologic Connectivity. Front. Microbiol. 8(1): 10.