Biological system functions
What are the functions of living systems?
All living systems, at all levels of organization, accomplish multiple functions that enable them to:
1️⃣ hold, use, and exchange information*, and
2️⃣ acquire, use, and transform matter and energy.
(*) Biological systems use different kinds of information. Living systems (a) store, use, and transfer genetic information, encoded in DNA, and (b) receive, produce, process and respond to non-genetic information, such as communication signals, and internal and external (chemical, electrical, sensory) stimuli. While not strictly necessary, we found the practical distinction between genetic and non-genetic information to be helpful in organizing our thinking about biological systems functions.
Examples of biological functions
Note: this is not intended as a comprehensive list of all functions of living systems! It is more of a "list of convenience": a work in progress that reflects our own thinking and experience with articulating some of the functions we explore in our classrooms.
Transformations of matter and energy
Examples at different levels of organization
Cells:
acquire energy from the environment in the form of light radiation (autotrophs) or chemical potential energy (heterotrophs), and acquire carbon in the form of carbon dioxide (autotrophs) or organic food molecules (heterotrophs)
exchange water and respiratory gases (oxygen and carbon dioxide) with the external environment by diffusion across the plasma membrane
use specialized transport proteins to carry ions and molecules across the plasma membrane, both passively (according to concentration gradients) and actively (against concentration gradients, with an energy expenditure)
oxidize carbohydrates through processes (cellular respiration, fermentation) that harness chemical energy to produce ATP
perform a great variety of endergonic metabolic reactions, powered by coupling with ATP hydrolysis
perform a great variety of oxidation-reduction (redox) reactions, enabled by cofactors that readily accept and donate electrons
Organisms:
complex multicellular organisms (e.g., plants, animals) move water and nutrients throughout their bodies by bulk flow within vascular systems
heterotrophs (animals) acquire matter and energy from the environment by ingesting bulk food, which they digest extracellularly to absorb its nutrient molecules
allocate matter and energy to different functions (such as growth, defense, and reproduction) in ways that maximize fitness.
Populations:
...
Genetic information flow, storage and exchange
Examples at different levels of organization
Cells:
store genetic information in molecules of DNA (chromosomes)
produce RNA molecules and proteins with specific functions, based on information encoded in genes
replicate their genomes and pass them onto daughter cells through mitosis, meiosis, or binary fission
check the integrity of their genomes and repair damage to DNA
regulate the timing and intensity of expression of their genes; consequently, cells can:
differentiate and acquire specialized forms and functions within multicellular organisms,
activate or inactivate specific genes in response to stimuli
Organisms:
display physical and behavioral traits dependent on their genotypes.
transmit genetic information to their offspring via asexual or sexual reproduction.
Populations:
hold repositories of genetic variation (gene pools, composed of all the alleles carried by all individuals in the population).
move alleles into and out of other populations by migration (gene flow).
Non-genetic information: sensing & responding to stimuli
Examples at different levels of organization
Cells:
perceive chemical signals through protein receptors on their surface (or inside the cytoplasm) and respond to these signals
in response to environmental or developmental cues, produce signal molecules that influence the functions of other cells, nearby or distant.
Organisms:
sense changes in their internal and external environment.
use chemical, electrical, or other forms of signaling to coordinate responses to internal/external stimuli at the cellular, tissue, organ, and/or system level.
regulate their internal conditions to achieve homeostasis
communicate with individuals of their species or other species
Examples of emergent phenomena in biology
Evolution
Coming soon
Homeostasis
Biological systems:
monitor and regulate multiple internal variables through control mechanisms that often use negative feedback loops;
typically maintain internal conditions within narrow, optimal ranges, regardless of changes in the environment;
can respond to changes in environmental conditions by acclimating.
Phenotype
Phenotype emerges from the complex interactions of genes and environment