The basics
- What is Genomics? the science of Genomes and its flourishing over the last decades
- Genomics Data. Not just sequences.
- Which types of genomic data are there?
- What may they refer to?
- Sequence
- Annotations
- Positional data
- Continuous data
- Visualizing Genomic data. Genome Browsers.
- UCSC
- ENSEMBL
- IGV (your own customizable browser)
- Retrieving Genomic data
- Genomic data formats
- Fasta, Fastq (sequences)
- BED, GFF (annotation, positional)
- WIG (annotation, continuous)
- Binary, BigBed, BigWig etc
- Genomic data Repositories
- The UCSC repository
- The Ensembl/Biomart DAS