Google Scholar link 

Journal articles:

•  [New] Sunil Kumar Gaire, Ali Daneshkhah, Ethan Flowerday, Ruyi Gong, Jane Frederick, and Vadim Backman "Deep learning-based spectroscopic single-molecule localization microscopy," Journal of Biomedical Optics 29(6), 066501 (24 May 2024). 

• Sunil Kumar Gaire, Yanhua Wang, Hao F. Zhang, Dong Liang, and Leslie Ying, "Accelerating 3D single-molecule localization microscopy using blind sparse inpainting," Journal of Biomedical Optics,  26(2), 026501 (2021).

• Sunil Kumar Gaire, Yang Zhang, Hongyu Li, Ray Yu, Hao F. Zhang, and Leslie Ying, "Accelerating multicolor spectroscopic single-molecule localization microscopy using deep learning," Biomed. Opt. Express 11 (5), 2705-2721 (2020) 

     This collaborative work was among the top five downloads from OSA's Biomedical Optics Express for May and April 2020 !

• Naveen Subhas, Hongyu Li, Mingrui Yang, Carl S. Winalski, Joshua Polster, Nancy Obuchowski, Kenji Mamoto, Ruiying Liu, Chaoyi Zhang, Peizhou Huang, Sunil Kumar Gaire, Dong Liang, Bowen Shen, Xiaojuan Li, Leslie Ying, “Diagnostic interchangeability of deep convolution neural network reconstructed knee MR images: preliminary experience,” Quant. Imaging. Med. Surg., 10 (9), 1748-1762 (2020).

Doctoral dissertation:

• "Accelerating single-molecule localization microscopy techniques using computational approaches," 2021

Master's Thesis:

• "Multilevel orthogonal coded modulations", 2017.

Conferences, Poster, Oral Presentation:

• Sunil Kumar Gaire, et al. "Simultaneous Multicolor Spectroscopic Single-molecule Localization Microscopy Image Reconstruction using Machine Learning," presented at the Optica Imaging Congress, August 2023 [Abstract link]. 

• Sunil Kumar Gaire, Ethan Flowerday, Jane Frederick, Ruyi Gong, Sravya Prabhala, Leslie Ying, Hao Zhang, and Vadim Backman, "Deep Learning-based Spectroscopic Single-molecule Localization Microscopy for Simultaneous Multicolor Imaging," Oral presentation on The 2022 Imaging and Applied Optics Congress and the 2022 Optical Sensors and Sensing Congress meeting, July 2022.

• Sunil Kumar Gaire, Choyi Zhang, Hongyu Li, Peizhou Huang, Ruiying Liu, Haifeng Wang, Dong Liang, and Leslie Ying, "Accelerated 3D Localization Microscopy Using Blind Sparse Inpainting," IEEE ISBI 2019.

• Sunil Kumar Gaire, Saleh Faruque, Md. Maruf Ahamed, "OptoRadio: a method of wireless communication using orthogonal M-ary PSK (OMPSK) modulation," SPIE Optical Engineering+ Applications, 99790D-99790D-9.

• Sunil Kumar Gaire, Saleh Faruque, "Performance Analysis of Orthogonal Coded M-Ary QAM Modulation Technique," IEEE CISS 2017, Baltimore, Maryland.

• Md. Maruf Ahamed, Saleh Faruque, Sunil Kumar Gaire, "Laser radio: backhaul solution for 5G networks," SPIE Optical Engineering+ Applications, 99790C-99790C-10.

• Ukash Nakarmi, Konstantinos Slavakis, Hongyu Li, Chaoyi Zhang, Peizouh Huang, Sunil Gaire, Leslie Ying, MLS: Self-learned Joint Manifold Geometry and Sparsity aware Framework for Highly Accelerated Cardiac Cine Imaging," ISMRM Annual Meeting and Exhibition, 2018.

• Peizhou Huang, Chaoyi Zhang, Hongyu Li, Sunil Kumar Gaire, Ruiying Liu, Xiaoliang Zhang, Xiaojuan Li, Liang Dong, and Leslie Ying, “Unsupervised deep learning reconstruction using the MR imaging model,” Digital poster at ISMRM & SMRT Virtual conference & Exhibition, August 2020. 

• Hongyu Li, Chaoyi Zhang, Zifei Liang, Dong Liang, Bowen Shen, Yulin Ge, Jiangyang Zhang, Ruiying Liu, Peizhou Huang, Sunil Kumar Gaire, Xiaoliang Zhang, Leslie Ying, “Deep Learned Diffusion Tensor Imaging,” Digital poster at ISMRM 27th Annual Meeting & Exhibition, 2019.

• Peizhou Huang, Chaoyi Zhang, Hongyu Li, Sunil Kumar Gaire, Ruiying Liu, Xiaoliang Zhang, Xiaojuan Li, and Leslie Ying, “Deep MRI reconstruction without ground truth for training,” Digital poster at ISMRM 27th Annual Meeting & Exhibition, 2019.

• Sunil Kumar Gaire, Yang Zhang, Hongyu Li, Hao F. Zhang, and Leslie Ying, “Faster spectroscopic single-molecule localization microscopy using deep learning,” Electrical Engineering Department poster competition, University at Buffalo, February 2020.

• Sunil Kumar Gaire, Saleh Faruque, “BER Performance Analysis of Orthogonal Coded M-ary QAM Modulation Technique over an AWGN Channel,” Poster presentation at ND EPSCoR/IDeA 2016 State Conference, April 2016.

• Sunil Kumar Gaire, Saleh Faruque, “Performance Analysis of Orthogonal Coded M-ary QAM Technique over an AWGN Channel,” Oral presentation at 2016 Scholarly Forum, University of North Dakota, March 2016.