publications

31. 

Exploring the potential effects of forest urbanization on the interplay between small mammal communities and their gut microbiota

Bouilloud M, Galan M, Pradel J, Loiseau A, Ferrero J, Gallet R, Roche B, Charbonnel N

2024 Animal Microbiome

DOI: in press

29. 

Small terrestrial mammals (Rodentia and Soricomorpha) along a gradient of forest anthropisation (reserves, managed forests, urban parks) in France

Pradel J, Bouilloud M, Loiseau A, Piry S, Galan M, Artige E, Castel G, Ferrero J, Gallet R, Thuel G, Vieira N, Charbonnel N  

2022 Biodiversity Data Journal 10:e95214

DOI: 10.3897/BDJ.10.e95214

28. 

Gene copy number variations at the within-host population level modulate gene expression in a multipartite virus

Gallet R, Di Mattia J, Ravel S, Zeddam JL, Vitalis R, Michalakis Y and Blanc S 

2022 Virus Evolution 8(2), 1–11

DOI: https://doi.org/10.1093/ve/veac058

25. 

Pharmacological analysis of transmission activation of two aphid-vectored plant viruses, turnip mosaic virus and cauliflower mosaic virus

Berthelot E, Macia JL, Martinière A, Morisset A, Gallet R, Blanc S, Khelifa M, and Drucker M 

2019 Scientific Reports, 9:9374   DOI : 10.1038/s41598-019-45904-7

24. 

A multicellular way of life for a multipartite virus

Sicard A, Pirolles E, Gallet R, Vernerey MS, Yvon M, Urbino C, Peterschmitt M, Gutierrez S, Michalakis Y and Blanc S

2019 Elife, eLife 2019;8:e43599  doi: 10.7554/eLife.43599

23.

Turnip mosaic virus is a second example of a virus using transmission activation for plant-to-plant propagation by aphids

Berthelot E, Ducousso M, Macia JL, Baecker V, Thébaud G, Gallet R, Yvon M, Blanc S, Khelifa M, and Drucker M

2019 Journal of Virology   DOI: 10.1128/JVI.01822-18

22.

Vector-transmission of plant viruses and constraints imposed by virus-vector interactions

Gallet R, Michalakis Y, Blanc S

2018 Current Opinion in Virology doi.org/10.1016/j.coviro.2018.08.005

21.

Cost of resistance: an unreasonably expensive concept 

Lenormand T, Harmand, N, Gallet R   

2018 Rethinking Ecology doi: 10.3897/rethinkingecology.3.31992

also published in

2018 PCI Evolutionary biology doi.org/10.1101/276675

20.

Experimental demonstration of the impact of hard and soft selection regimes on polymorphism maintenance in spatially heterogeneous environments     

Gallet R, Froissart R, Ravigné V

2018 Evolution doi: 10.1111/evo.13513      

also published as

Things softly attained are long retained: Dissecting the impact of selection regimes on polymorphism maintenance in experimental spatially heterogeneous environments

Gallet R, Froissart R, Ravigné V

2017 PCI Evolutionary biology doi: 10.24072/pci.evolbiol.100020

19.

Evolution of bacteria specialization along an antibiotic dose gradient

Harmand, N, Gallet R, Martin G, Lenormand T

2018 Evolution Letters doi.org/10.1002/evl3.52

18.

Small bottleneck size in a highly multipartite virus during a complete infectious cycle

Gallet R, Fabre F, Thébaud G, Sicard A, Blanc S, Michalakis Y

2018 Journal of Virology  JVI.00139-18

17. 

Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta river region of France

Gallet R, Kraberger S, Filloux D, Galzi S, Fontes H, Martin D.P., Varsani A, and Roumagnac P

2017 Archives of Virology doi.org/10.1007/s00705-017-3634-4

16.

The number of target molecules of the amplification step limits accuracy and sensitivity in ultra deep sequencing viral population studies

Gallet R, Fabre F, Michalakis Y, Blanc S

2017 Journal of Virology  J Virol 91:e00561-17

Spotlighted by the journal editors as one of the five especially meritorious articles in the issue

15.

The evolution of bacterial size: the internal diffusion-constraint hypothesis

Gallet R, Violle C, Fromin N, Zahab R, Enquist BJ, Lenormand T

2017 ISME journal - Multidisciplinary journal in microbial ecology (Nature publishing) doi:10.1038/ismej.2017.35

14.

Fisher’s geometric model and the mutational patterns of antibiotic resistance across dose gradients

Harmand, N, Gallet R, Jabbour-Zahab R, Martin G, Lenormand T

2017 Evolution, 71-1:23-37 doi:10.1111/evo.13111

Highlighted by Lauren Harrison in Evolution doi:10.1111/evo.13149

Recommanded here by Fragata & Bank in Peer Community in Evolutionary biology  

13.

Diverse phenotypic and genetic responses to short-term selection in evolving Escherichia coli populations

Dillon MM, Rouillard NP, Van Dam B, Gallet R, Cooper VS

2016 Evolution, 70-3: 586–599 doi:10.1111/evo.12868

12. 

Evolution of compatibility range in the rice-Magnaporthe oryzae system: an uneven distribution of R genes between rice subspecies

Gallet R, Fontaine C, Bonnot F, Milazzo J, Tertois C, Adreit H, Ravigné V, Fournier E, Tharreau D

2016 Phytopathology, 106-4:348-354 http://apsjournals.apsnet.org/doi/10.1094/PHYTO-07-15-0169-R  

11.

Niche limits of symbiotic gut microbiota constrain the salinity tolerance of brine shrimp

Nougué O, Gallet R, Chevin L-M, Lenormand T

2015 The American Naturalist, doi: 10.1086/682370

Populaziring article in National Geographic

10.

The dynamics of niche evolution upon abrupt environmental change 

Gallet R., Latour Y., Hughes B.S., Lenormand T.

2014 Evolution, 68-5: 1257–1269  doi:10.1111/evo.12359

Highlighted by B. Koshella in Evolutionary Application 2014 doi: 10.1111/eva.12158

9.

The variety mixture strategy in a GxG experiment with rice and the blast fongus Magnaporthe oryzae     

Gallet R., Bonnot F., Milazzo J., Tertois C, Adreit H., Ravigné V., Tharreau D, Fournier E.

2014 Frontiers in genetics, 4:1-11 doi:10.1098/rstb.2012.0089

8.

Phenotypic plasticity in evolutionary rescue experiments   

Chevin L. M., Gallet R., Gomulkiewicz R., Holt R. and Fellous S.

2013 Phil. Trans. R. Soc. B., 368-1610:20120089 doi:10.3389/fgene.2013.00312

7.

Phenotypic stochasticity prevents lytic bacteriophage population from extinction during  bacterial stationary phase

Gallet R., Lenormand T., Wang I.N.

2012, Evolution, 66-11:3485-3494 doi: 10.1111/j.1558-5646.2012.01690.x

6.

The high throughput yeast deletion data and the theories of dominance

Manna F., Gallet R., Martin G. and Lenormand T.

2012 Journal of Evolutionary Biology, 25(5):892-903 doi: 10.1111/j.1420-9101.2012.02483.x

5.

Measuring selection coefficients below 10-3: method, questions and prospects

Gallet R., Cooper T.F., Elena S.F., Lenormand, T.

2012 Genetics, 190: 175-186

4.

Effects of bacteriophage traits on plaque formation

Gallet R., Kannoly S., Wang I.N.

2011 BMC Microbiology, 11:181 doi:10.1186/1471-2180-11-181

3. 

High adsorption rate is detrimental to bacteriophage fitness in a biofilm-like environment

Gallet, R., Shao Y., Wang I.N.

2009 BMC Evolutionary Biology, 9:241 doi:10.1186/1471-2148-9-241

2.

Ecological conditions affect evolutionary trajectory in a predator-prey system

Gallet R., Tully T., Evans M.E.K.

2009 Evolution, 63-3: 641–651

1.

Predation and disturbance interact to shape prey species diversity

Gallet, R., Alizon S., Comte P.A., Guttierrez A., Depaulis F., van Baalen M., Michel E., Müller-Graf C.D.M.

2007 The American Naturalist, 170: 143–154