Softwares

Codes for my most recent papers can be found in my GitHub.

Scripts for demographic models selection via Convolutional Neural Networks for phylogeographic models selection and parameter estimation can be found here (Oliveira et al. 2019):

https://github.com/manolofperez/CNN_DemographyArapaima

An example of the use of Convolutional Neural Networks for species delimitation can also be seen here (Perez et al. 2019): https://github.com/manolofperez/CNN_spDelimitation

microsat2arp.py - Python script that converts microsatellite data simulated under the software microsat from ms (Hudson 2002) package to arlequin format. This conversion allows to automate the summary statistics calculation from microsat datasets.

Python scripts to simulate data for ABC analysis with ms package. These scripts were used in Perez et al. (2016 - HEREDITY).