Publications
Citation Metric
Journal Covers
2024
Load Balancing for Higher Performance Computing using Quantum Annealing
O. Rathore, A. Basden, N. Chancellor, and H. Kusumaatmaja*,
submitted for publication (2024) [www] [arxiv].Finding Transition State and Minimum Energy Path of Bistable Elastic Continua
G. Wan, S. J. Avis, Z. Wang, X. Wang, H. Kusumaatmaja*, and T. Zhang
Journal of the Mechanics and Physics of Solids 183, 105503 (2024) [www] [arxiv].
2023
Droplet Self-Propulsion on Slippery Liquid-Infused Surfaces with Dual Lubricant Wedge-Shaped Wettability Patterns
M. Pelizzari, G. McHale, S. Armstrong, H. Zhao, R. Ledesma-Aguilar, G. G. Wells, and H. Kusumaatmaja
Langmuir 39, 15676-15689 (2023) [www] [arxiv].Phase Field Simulation of Liquid Filling on Grooved Surfaces for Complete, Partial and Pseudo-partial Wetting Cases
F. Oktasendra, A. Jusufi, A. R. Konicek, M. S. Yeganeh, J. R. Panter, and H. Kusumaatmaja*
Journal of Chemical Physics 158, 204501 (2023) [www] [arxiv].A Novel Bending Rigidity Parameter for Stress Granule Condensates
J. O. Law, C. M. Jones, T. Stevenson, T. A. Williamson, M. S. Turner, H. Kusumaatmaja*, and S. N. Grellscheid
Science Advances 9, eadg0432 (2023) [www] [bioRxiv]. News Article from the University of Bergen [www].Bubble Formation in Magma
J. E. Gardner, F. B. Wadsworth, T. Carley, E. W. Llewellin, H. Kusumaatmaja, and D. Sahagian
Annual Review of Earth and Planetary Sciences 5, 131-54 (2023) [www] [DRO].Rough Capillary Rise
J. R. Panter, A. R. Konicek, M. A. King, A. Jusufi, M. S. Yeganeh, and H. Kusumaatmaja*
(Nature) Communications Physics 6, 44 (2023) [www] [DRO].
2022
3D-Printed Liquid Diodes with Tunable Velocity: Design Guidelines and Applications for Liquid Collection and Transport
C. Sammartino, M. Rennick, H. Kusumaatmaja*, and B.-E. Pinchasik
Physics of Fluids 34, 112113 (2022) [www] [arXiv].Modelling the Dynamics of Partially Wetting Droplets on Fibres
R. Christianto, Y. Rahmawan, C. Semprebon, and H. Kusumaatmaja*
Physical Review Fluids 7, 103606 (2022) [www] [arXiv].A Robust and Memory-Efficient transition state search method for complex energy landscapes
S. J. Avis, J. R. Panter, and H. Kusumaatmaja*
Journal of Chemical Physics 157, 124107 (2022) [www] [arXiv].A Minimal Model of Elastic Instabilities in Biological Filament Bundles
J. R. Panter, H. Kusumaatmaja, and C. Prior
Journal of the Royal Society Interface 19, 20220287 (2022) [www] [DRO].Spontaneous Phase Separation of Ternary Fluid Mixtures
A. C. M. Shek and H. Kusumaatmaja*
Soft Matter 18, 5807-5814 (2022) [www] [arXiv].Systematic Characterization of Effect of Flow Rates and Buffer Compositions on Double Emulsion Droplet Volumes and Stability
S. G. K. Calhoun, K. K. Brower, V. N. Suja, G. Kim, N. Wang, A. L. McCully, H. Kusumaatmaja, G. G. Fuller and P. M. Fordyce
Lab on a Chip 22, 2315-2330 (2022) [www] [bioRxiv]. Selected in Lab on a Chip Hot Articles 2022 [www]Development of a Setup to Characterise Capillary Liquid Bridges between Liquid Infused Surfaces
S. J. Goodband, H. Kusumaatmaja* and K. Voitchovsky
AIP Advances 12, 015120 (2022) [www] [DRO]. Highlighted by a Scilight article [www].
2021
Tailoring the Multistability of Origami-Inspired, Buckled Magnetic Structures via Compression and Creasing
Y. Li, S. J. Avis, T. Zhang, H. Kusumaatmaja* and X. Wang
Materials Horizon 8, 3324 (2021) [www] [DRO]. Part of themed collection: 2021 Materials Horizons most popular articles.Apparent Contact Angle of Droplets on Liquid Infused Surfaces: Geometric Interpretation
C. Semprebon, M. S. Sadullah G. McHale and H. Kusumaatmaja*
Soft Matter 17, 9553 (2021) [www] [arXiv]. Selected as Journal Front Cover [www].
Intracellular Wetting Mediates Contact between Liquid Compartments and Membrane-Bound Organelles
H. Kusumaatmaja*, A. I. May, and R. L. Knorr
Journal of Cell Biology 220, e202103175 (2021) [www][DRO].
Wetting of Phase-Separated Droplets on Vacuole Membranes Leads to A Competition between Tonoplast Budding and Nanotube Formation
H. Kusumaatmaja*, A. I. May, M. Feeney, J. F. McKenna, N. Mizushima, L. Frigerio and R. L. Knorr
Proceedings of the National Academy of Sciences 118, e2024109118 (2021) [www] [DRO].
Reconfiguration of Multistable 3D Ferromagnetic Mesostructures Guided by Energy Landscape Surveys
Y. Li, S. J. Avis, J. Chen, G. Wu, T. Zhang, H. Kusumaatmaja* and X. Wang
Extreme Mechanics Letters 48, 101428 (2021) [www] [ResearchSquare].
OpenLB - Open Source Lattice Boltzmann Code
M. J. Krause, A. Kummerländer, S. J. Avis, H. Kusumaatmaja, D. Dapelo, F. Klemens, M. Gaedtke, N. Hafen, A. Mink, R. Trunk, M. Haussmann and S. Simonis
Computers and Mathematics with Applications 81, 258-288 (2021) [www][DRO].
Predicting Hemiwicking Dynamics on Textured Substrates
B. Natarajan, A. Jaishankar, M. King, F. Oktasendra, S. J. Avis, A. Konicek, G. Wadsworth, A. Jusufi, H. Kusumaatmaja and M. Yeganeh
Langmuir 37, 188-195 (2021) [www][DRO].
Control of Superselectivity by Crowding in Three-Dimensional Hosts
A. R. Christy, H. Kusumaatmaja* and M. A. Miller
Physical Review Letters 126, 028002 (2021) [www] [arXiv].
Capillary Bridges on Liquid Infused Surfaces
A. C. M. Shek, C. Semprebon, J. R. Panter and H. Kusumaatmaja*
Langmuir 37, 908-917 (2021) [www] [arXiv].
Modelling Ternary Fluids in Contact with Elastic Membranes
M. Pepona, A. C. M. Shek, C. Semprebon, T. Krüger and H. Kusumaatmaja*
Physical Review E 103, 022112 (2021) [www] [arXiv].
2020
Self-Assembly of Small Molecules at Hydrophobic Interfaces using Group Effect
W. J. Foster, K. Miyazawa, T. Fukuma, H. Kusumaatmaja and K. Voitchovsky
Nanoscale 12, 5452 (2020) [www] [arXiv].
The Effect of Ageing on the Structure and Properties of Model Liquid Infused Surfaces
S. J. Goodband, S. Armstrong, H. Kusumaatmaja* and K. Voitchovsky
Langmuir 36, 3461-3470 (2020) [www] [arXiv].
Modelling Double Emulsion Formation in Planar Flow-Focussing Microchannels
N. Wang, C. Semprebon, C. Zhang, H. Liu and H. Kusumaatmaja*
Journal of Fluid Mechanics 895, A22 (2020) [www] [arXiv].
Unrestrained ESCRT-III Drives Chromosome Fragmentation and Micronuclear Catastrophe
M. Vietri, S. W. Schultz, A. Bellanger, C. M. Jones, C. Raiborg, E. Skarpen, C. R. J. Pedurupillay, E. Kip, R. Timmer, A. Jain, P. Collas, R. L. Knorr, S. N. Grellscheid, H. Kusumaatmaja, A. Brech, F. Micci, H. Stenmark and C. Campsteijn
Nature Cell Biology 22, 856-867 (2020) [www] [bioRXiv]. Highlighted by Nature Reviews Molecular Cell Biology [www] and phys.org [www].
Axisymmetric Flows on the Torus Geometry
S. Busuioc, H. Kusumaatmaja* and V. E. Ambrus
Journal of Fluid Mechanics 901, A9 (2020) [www] [arXiv].
Critical Pressure Asymmetry in the Enclosed Fluid Diode
J. R. Panter, Y. Gizaw and H. Kusumaatmaja*
Langmuir 36, 7463–7473 (2020) [www] [arXiv].
Self-Propelled Droplet Transport on Shaped-Liquid Surfaces
G. Launay, M. S. Sadullah, G. McHale, R. Ledesma-Aguilar, H. Kusumaatmaja and G. G. Wells
Scientific Reports 10, 14987 (2020) [www] [arXiv].
Factors Controlling the Pinning Force of Liquid Droplets on Liquid Infused Surfaces
M. S. Sadullah, J. R. Panter and H. Kusumaatmaja*
Soft Matter 16, 8114 (2020) [www] [arXiv]. Selected as Journal Front Cover [www].
Bidirectional Motion of Droplets on Gradient Liquid Infused Surfaces
M. S. Sadullah, G. Launay, J. Parle, R. Ledesma-Aguilar, Y. Gizaw, G. McHale, G. G. Wells and H. Kusumaatmaja*
(Nature) Communications Physics 3, 166 (2020) [www] [arXiv].
Phase Transitions on Non-Uniform Curved Surfaces: Coupling between Phase and Location
J. O. Law, J. M. Dean, M. A. Miller and H. Kusumaatmaja*
Soft Matter 16, 8069 (2020) [www] [arXiv].
2019
Multifaceted Design Optimisation for Superomniphobic Surfaces
J. R. Panter, Y. Gizaw and H. Kusumaatmaja*
Science Advances 5, eaav7328 (2019) [www] [arXiv]. Highlighted by Durham University [www], phys.org [www], and SoftComp [www1][www2].
Wetting boundaries for ternary high-density ratio lattice Boltzmann method
N. Baala, M. Pepona, I. Karlin, H. Kusumaatmaja* and C. Semprebon
Physical Review E 100, 013308 (2019) [www] [arXiv]. Editors' Suggestion.
Morphological analysis of chiral rod clusters from a novel coarse-grained chiral potential
B. J. Sutherland, S. W. Olesen, H. Kusumaatmaja*, J. W. R. Morgan and D. J. Wales
Soft Matter 15, 8147-8155 (2019) [www] [arXiv].
Learning dynamical information from static protein and sequencing data
P. Pearce, F. G. Woodhouse, A. Forrow, A. Kelly, H. Kusumaatmaja* and J. Dunkel
Nature Communications 10, 5368 (2019) [www] [bioRxiv]. Included in the collection Molecular Dynamics simulations and Computational methods in Life Science [www].
Harnessing energy landscape exploration to control the buckling of cylindrical shells
J. R. Panter, J. Chen, T. Zhang and H. Kusumaatmaja*
(Nature) Communications Physics 2, 151 (2019) [www] [arXiv].
Multicomponent flow on curved surfaces: A vielbein lattice Boltzmann approach
V. E. Ambrus, S. Busuioc, A. J. Wagner, F. Paillusson and H. Kusumaatmaja*
Physical Review E 100, 063306 (2019) [www] [arXiv].
2018
Dynamic Morphologies and Stability of Droplet Interface Bilayers
B. Guiselin, J. O. Law, B. Chakrabarti and H. Kusumaatmaja*
Physical Review Letters 120, 238001 (2018) [www] [arXiv].
Ternary free-energy entropic lattice Boltzmann model with high density ratio
M. Wörhwag, C. Semprebon, A. Mazloomi M., I. Karlin and H. Kusumaatmaja*
Physical Review Letters 120, 234501 (2018) [www] [arXiv].
Nucleation on a sphere: the roles of curvature, confinement and ensemble
J. O. Law, A. Wong, H. Kusumaatmaja* and M. A. Miller
Molecular Physics 116, 3008-3019 (2018) [www] [arXiv]. Daan Frenkel Special Issue.
Drop dynamics on liquid infused surfaces: the role of the lubricant ridge
M. S. Sadullah, C. Semprebon and H. Kusumaatmaja*
Langmuir 34, 8112–8118 (2018) [www] [arXiv].
In-situ molecular-level observation of methanol catalysis at the water-graphite interface
J. W. Foster, J. A. Aguilar, H. Kusumaatmaja and K. Voitchovsky
ACS Applied Materials & Interfaces 10, 34265–34271 (2018) [www] [arXiv].
Measuring Bilayer Surface Energy and Interface Curvature in Asymmetric Droplet Interface Bilayers
N. E. Barlow, H. Kusumaatmaja, A. Salehi-Reyhani, N. Brooks, L. M. C. Barter, A. J. Flemming and O. Ces
Journal of the Royal Society Interface 15, 20180610 (2018) [www] [arXiv].
2017
Apparent Contact Angle and Contact Angle Hysteresis on Liquid Infused Surfaces
C. Semprebon, G. McHale and H. Kusumaatmaja*
Soft Matter 13, 101-110 (2017) [www] [arXiv]. Emerging Investigator 2017 Special Issue. Inside Front Cover [www].
The Impact of Surface Geometry, Cavitation, and Condensation on Wetting Transitions: Posts and Reentrant Structures
J. R. Panter and H. Kusumaatmaja*
Journal of Physics: Condensed Matter 29, 084001 (2017) [www] [arXiv]. Special issue on Complex Fluids at Structured Surfaces. Highlighted by JPhys+ Blog [www].
Edge fracture in complex fluids
E. J. Hemingway, H. Kusumaatmaja and S. M. Fielding
Physical Review Letters 119, 028006 (2017) [www] [arXiv].
On the Critical Casimir Interaction between Anisotropic Inclusions on a Membrane
J. Benet, F. Paillusson and H. Kusumaatmaja*
Physical Chemistry Chemical Physics 19, 24188 - 24196 (2017) [www] [arXiv].
2016
Moving contact line dynamics: from diffuse to sharp interfaces
H. Kusumaatmaja*, E. J. Hemingway and S. M. Fielding
Journal of Fluid Mechanics 788, 209 - 227 (2016) [www] [arxiv].
A Ternary Free Energy Lattice Boltzmann Model with Tunable Surface Tensions and Contact Angles
C. Semprebon, T. Krüger and H. Kusumaatmaja*
Physical Review E 93, 033305 (2016) [www] [arXiv]. One of the figures is chosen for PRE Kaleidoscope [www].
Energetically favoured defects in dense packings of particles on spherical surfaces
S. Paquay, H. Kusumaatmaja, D. J. Wales, R. Zandi, and P. van der Schoot
Soft Matter 12, 5708 - 5717 (2016) [www] [arXiv].
Kinetic Transition Networks for the Thomson Problem and Smale’s Seventh Problem
D. Mehta, J. Chen, D. Z. Chen, H. Kusumaatmaja and D. J. Wales
Physical Review Letters 117, 028301 (2016) [www] [arXiv] [Notre Dame press release] [phys.org] [CMP highlight] [AMS Math in the Media]. Chosen as PRL Editors' Suggestion.
Phase Separation on Bicontinuous Cubic Membranes: Symmetry Breaking, Re-entrant and Domain Facetting
F. Paillusson, M. R. Pennington and H. Kusumaatmaja*
Physical Review Letters 117, 058101 (2016) [www] [arXiv].
2015
Surveying the Free Energy Landscapes of Continuum Models: Applications to Soft Matter Systems
H. Kusumaatmaja*
The Journal of Chemical Physics 142, 124112 (2015) [www] [arxiv].
Free Energy Pathways of a Multistable Liquid Crystal Device
H. Kusumaatmaja* and A. Majumdar
Soft Matter 11, 4809 - 4817 (2015) [www] [arxiv].
2014
Design principles for Bernal spirals and helices with tunable pitch
S. N. Fejer, D. Chakrabarti, H. Kusumaatmaja and D. J. Wales
Nanoscale 6, 9448 - 9456 (2014) [www] [DRO].
A conformational factorisation approach for estimating the binding free energies of macromolecules
K. Mochizuki, C. S. Whittleston, S. Somani, H. Kusumaatmaja and D. J. Wales
Physical Chemistry Chemical Physics 16, 2842 - 2853 (2014) [www] [DRO]. PCCP cover [www]. Hot Article [www].
Exploring energy landscapes: from molecular to mesoscopic systems
D. Chakrabarti, H. Kusumaatmaja, V. Ruhle and D. J. Wales
Physical Chemistry Chemical Physics 16, 5014 - 5025 (2014) [www] [DRO]. PCCP cover [www].
2013
Exploring energy landscapes: metrics, pathways, and normal mode analysis for rigid-body molecules
V. Ruhle, H. Kusumaatmaja, D. Chakrabarti and D. J. Wales
Journal of Chemical Theory and Computation 9, 4026 (2013) [www] [DRO].
Defect motifs for constant mean curvature surfaces
H. Kusumaatmaja* and D. J. Wales
Physical Review Letters 110, 165502 (2013) [www] [arXiv].
Anisotropic wetting and de-wetting of drops on substrates patterned with polygonal posts
R. J. Vrancken, M. L. Blow, H. Kusumaatmaja, K. Hermans, A. M. Prenen, C. W. M. Bastiaansen, D. J. Broer and J. M. Yeomans
Soft Matter 9, 674 - 683 (2013) [www] [arXiv].
2012
A Local Rigid Body Framework for Global Optimization of Biomolecules
H. Kusumaatmaja*, C. S. Whittleston and D. J. Wales
Journal of Chemical Theory and Computation 8, 5159 (2012) [www] [DRO].
Non-isomorphic nucleation pathways arising from morphological transitions of liquid channels
H. Kusumaatmaja*, R. Lipowsky, C. Jin, R. -C. Mutihac and H. Riegler
Physical Review Letters 108, 126102 (2012) [www] [arXiv].
Wetting-induced budding of vesicles in contact with several aqueous phases
Y. Li, H. Kusumaatmaja, R. Lipowsky and R. Dimova
The Journal of Physical Chemistry B 116, 1819 (2012) [www] [arXiv].
2011
Droplet-induced budding transitions of membranes
H. Kusumaatmaja* and R. Lipowsky
Soft Matter 7, 6914 (2011) [www] [arXiv]. Hot article [www].
2010
Equilibrium morphologies and effective spring constants of capillary bridges between structured surfaces
H. Kusumaatmaja* and R. Lipowsky
Langmuir 26, 18734 (2010) [www] [arXiv].
Drop dynamics on hydrophobic and superhydrophobic surfaces
B. M. Mognetti, H. Kusumaatmaja and J. M. Yeomans
Faraday Discussions 146, 195 (2010) [www] [arXiv].
Fully reversible transition from Wenzel to Cassie-Baxter states on corrugated superhydrophobic surfaces
R. J. Vrancken, H. Kusumaatmaja*, K. Hermans, A. M. Prenen, O. Pierre Louis, C. W. M. Bastiaansen and D. J. Broer
Langmuir 26, 3335 (2010) [www] [arXiv].
2009
Intrinsic contact angle of aqueous phases at membranes and vesicles
H. Kusumaatmaja*, Y. Li, R. Dimova and R. Lipowsky
Physical Review Letters 103, 238103 (2009) [www] [DRO]. Max Planck press release [www].
Imbibition through an array of triangular posts
M. L. Blow, H. Kusumaatmaja and J. M. Yeomans
Journal of Physics: Condensed Matter 21, 464125 (2009) [www] [arXiv].
Anisotropic hysteresis on ratcheted superhydrophobic surfaces
H. Kusumaatmaja* and J. M. Yeomans
Soft Matter 5, 2704 (2009) [www] [arXiv].
Modelling the corrugation of the three-phase contact line perpendicular to a chemically striped susbtrate
F. J. Montes Ruiz-Cabello, H. Kusumaatmaja, M. A. Rodriguez-Valverde, J. M. Yeomans and M. A. Cabrerizo-Vilchez
Langmuir 25, 8357 (2009) [www] [arXiv].
Modelling capillary filling dynamics using lattice Boltzmann simulations
C. M. Pooley, H. Kusumaatmaja and J. M. Yeomans
European Physical Journal Special Topics 171, 63 (2009) [www] [arXiv].
2008
Contact line dynamics in binary lattice Boltzmann simulations
C. M. Pooley, H. Kusumaatmaja and J. M. Yeomans
Physical Review E 78, 056709 (2008) [www] [arXiv].
Capillary filling in patterned channels
H. Kusumaatmaja*, C. M. Pooley S. Girardo, D. Pisignano and J. M. Yeomans
Physical Review E 77, 067301 (2008) [www] [arXiv].
Anisotropic drop morphologies on corrugated surfaces
H. Kusumaatmaja*, R. J. Vrancken, C. W. M. Bastiaansen and J. M. Yeomans
Langmuir 24, 7299 (2008) [www] [arXiv].
The collapse transition on superhydrophobic surfaces
H. Kusumaatmaja*, M. L. Blow, A. Dupuis and J.M. Yeomans
Europhysics Letters 81, 36003 (2008) [www] [arXiv].
2007
Modelling drop dynamics on patterned surfaces
J. M. Yeomans and H. Kusumaatmaja*
Bulletin of the Polish Academy of Sciences, Technical Sciences 55, 203 (2007) [www].
Modeling Contact Angle Hysteresis on Chemically Patterned and Superhydrophobic Surfaces
H. Kusumaatmaja* and J.M. Yeomans
Langmuir 23, 6019 (2007) [www] [arXiv].
Controlling drop size and polydispersity using chemically patterned surfaces
H. Kusumaatmaja* and J.M. Yeomans
Langmuir 23, 956 (2007) [www] [arXiv].
2006
Lattice Boltzmann simulations of drop dynamics
H. Kusumaatmaja*, A. Dupuis, and J.M. Yeomans
Mathematics and Computers in Simulation 72, 160 (2006) [www].
Drop dynamics on chemically patterned surfaces
H. Kusumaatmaja*, J. Leopoldes, A. Dupuis, and J.M. Yeomans
Europhysics Letters 73, 740 (2006) [www] [arXiv].
Thesis, Book and Book Chapters:
Colloidal crystals on curved surfaces
M. A. Miller, J. O. Law, A. F. Gerrand and H. Kusumaatmaja*
Energy Landscapes of Nanoscale Systems, Frontiers of Nanoscience series, dedicated to Roy L. Johnston
D. J. Wales (editor), Elsevier (2022).Lattice Boltzmann Method: Principles and Practice
T. Krüger, H. Kusumaatmaja, A. Kuzmin, O. Shardt, G. Silva and E. M. Viggen
Graduate Text in Physics, Springer (2017) [Amazon][Springer].
Lattice Boltzmann simulations of wetting and drop dynamics
H. Kusumaatmaja and J. M. Yeomans
Chapter 11 of Simulating Complex Systems by Celullar Automata [www]
A. G. Hoekstra, J. Kroc and P. M. A. Sloot (editors), Springer (2010).
Lattice Boltzmann Studies of Wetting and Spreading on Patterned Surfaces
H. Kusumaatmaja
DPhil Thesis, Balliol College, University of Oxford (2008) [www].