Research

In the Grogan lab, we investigate the impact of genetic and epigenetic variation on differences in fitness across environmental conditions. With the effects of human-induced climate change becoming more pronounced, research at the intersection of the environmental change, evolutionary genomics, and individual fitness is critical to our ability to conserve biodiversity and understand humanity’s ability to adapt to climate change. By using human and non-human primate models, our work has direct applications to both human health research and conservation work. To ask these questions, we integrate anthropological genomics, evolutionary biology, and biomedicine, and apply our findings widely, from the conservation of endangered species to improving human health. In achieving these research goals, we train and support developing and independent scientists, with an emphasis on advancing impactful and ethical research practices through the innovation that results from a diverse and welcoming team.

Furthermore, because we investigate questions relating to human variation and evolution as well as endangered species conservation and we work with and near marginalized peoples in areas of the world with long histories of colonial oppression, our work, including the act of conducting research as well as the publication of our findings, can have real world implications that extend beyond the lab. Thus, we incorporate the consideration of ethical implications of our work and we involve the participant communities in our work throughout the research process, from study design through publication, with the goal of reducing the potential for harm from our research as much as possible. Dr. Grogan is currently developing projects to examine how long-term environmental change has affected human hunter-gatherers in Southwest Uganda and how short-term environmental variation affects wild ring-tailed lemurs in Southwest Madagascar.

Current Projects

Gene expression, health, and survival across extreme climate events in Madagascar

This project asks how genomic and epigenomic variation is shaped by environmental variation, such as microhabitat variation and extreme climate events (ECEs), in order to explain variation in phenotype and fitness (i.e., health, survival, and reproduction). In previous work, I found that immunogenetic variation in ring-tailed lemurs was associated with survival and reproductive success, but the relationship was mediated by the occurrence of ECEs. 

The wild ring-tailed lemurs at Beza Mahafaly Special Reserve (BMSR), Madagascar have experienced five ECEs in the past two decades, including severe droughts in 2003, 2009-2010, and 2016 to the present, and extremely high rainfall and flooding related to the occurrence of cyclones in 2005-2006. Leveraging my expertise in studying genetic variation and fitness in this species, I will study the impact of the of these ECEs, in order to reveal the interplay between genetic diversity, physiology, fitness, and environmental variation. From an evolutionary perspective, identifying if gene regulation changes in response to shifting environments and stressors can help us understand the interaction between fitness, genotype, and anthropogenic change with applications towards conserving species, and predicting evolutionary responses in the face of climate change, especially for long-lived species. 

Effects of environmental change on health and the epigenome

This project investigates the effects of major, long-term shifts in environment, specifically how these environmental shifts affect gene regulation and expression as well as health using the Batwa rainforest hunter-gatherers as a model. The Batwa hunter-gatherers and Bakiga agriculturalists of Uganda represent an ideal ‘natural experiment’: The long-term ecological histories of these two populations are distinct, and the Batwa hunter-gatherer and Bakiga agriculturalist genomes have adapted to their respective lifestyles and environments over the last 10,000 years. 

The Batwa, however, were resettled outside of the forest in 1992 onto agricultural land interspersed with Bakiga settlements, such that they now share an environment and subsistence modes. 

Thus, the Batwa hunter-gatherer genome is now under the selective regime of an agriculturalist lifestyle, creating a ‘genome-environment mismatch’.  I plan to characterize how the timing of this transition, either before or after reaching adulthood, has affected patterns of gene regulation and health with an eye to understanding the role of environmental change in human physiology and disease.

Previous Projects

Postdoctoral Project at Pennsylvania State University

Photo by Dr. Perry

Functional epigenomics of growth and development in human hunter-gatherers and agriculturalists with Dr. George PJ Perry

Differences in living strategy, e.g. hunting and gathering versus agriculture, result in differences in most aspects of human existence including living environment, activity level, and nutritional intake. For the Batwa rainforest hunter-gatherers and Bakiga agriculturalists from Uganda, these differences have led to variation in body size, with the Batwa being significantly smaller in stature than the Bakiga. I investigated the regulation of genes (via growth hormone challenges) related to growth and development in order to advance our understanding of evolutionary and ecological influences on human growth patterns as well as the flexibility of the mechanisms regulating these pathways.

See Grogan & Perry 2020

Collaborators: George (PJ) Perry, Christina Bergey, & Luis Barreiro

Postdoctoral Work at Emory University

Effects of gene divergence on behavioral polymorphisms in the white-throated sparrow with Dr. Donna Maney

Social behaviors like risk-taking, aggression, and parental care have a neuroendocrine basis that is both biologically based and well conserved across vertebrates. While at Emory University, I studied the neuroendocrine and genetic bases of social behavior in the white-throated sparrow (Zonotrichia albicollis).

See Grogan et al. 2019, Merritt et al. 2020, Sun et al. 2021

Collaborators: Donna Maney, Soojin Yi, Jennifer Merritt, Wendy Zinzow-Kramer, & Dan Sun

Photo by Dr. Horton

Dissertation Work at Duke University

Effects of immunogenetic diversity on fitness in wild and captive ring-tailed lemurs with Dr. Christine Drea

My dissertation investigated if diversity at functional genes critical to the immune system (i.e., genes of the Major Histocompatibility Complex or MHC) predicts (a) health, (b) survival, (c) olfactory advertisement and MHC-based discrimination, and (d) lifetime reproductive success in ring-tailed lemurs (Lemur catta), both in captivity at the Duke Lemur Center (DLC) in North Carolina, and in the wild at Beza Mahafaly Special Reserve, Madagascar.  

Collaborators: Christine Drea, Michelle Sauther, Frank Cuozzo, Sarah Zohdy, Joyce Parga, Marylene Boulet, & Rachel Harris

See Grogan et al. 2016, Grogan et al. 2017, Harris et al. 2018, Grogan et al. 2019