Publications and writing
Peer-reviewed research reports
Oertel C, Colder B, Colombe J, High J, Ingram M, and Sallee P (2008) Current challenges in automating visual perception. Proceedings of the 37th IEEE Advanced Imagery Pattern Recognition (AIPR) Workshop, Washington DC, October 2008. [ pdf ]
Colombe JB and Necioglu B (2007) Super-resolution of video sequences using local motion estimates. Proceedings of the 36th IEEE Advanced Imagery Pattern Recognition (AIPR) Workshop, Washington DC, October 2007. [ pdf ]
Morgan AA, Wellner B, Colombe JB, Arens R, Colosimo ME, Hirschman L (2007) Evaluating the automatic mapping of human gene and protein mentions to unique identifiers. Pacific Symposium on Biocomputing 12:281-291 [ pdf ]
Colombe JB (2006) 3D shape estimation and texture generation using texture foreshortening cues. Proceedings of the 35th IEEE Applied Imagery Pattern Recognition (AIPR) workshop, Washington DC, October 2006. [ pdf ]
Colosimo ME, Morgan AA, Yeh AS, Colombe JB, and Hirschman L (2005) Data preparation and interannotator agreement: BioCreAtIvE task 1B. BMC Bioinformatics 6 Suppl 1:S12. Honorable mention, FY06 MITRE Best Paper competition. [ pdf ]
Morgan AA, Hirschman L, Colosimo M, Yeh A, and Colombe JB (2004) Gene name identification and normalization using a model organism database. Journal of Biomedical Informatics 37:396-410. Honorable mention, FY05 MITRE Best Paper competition. [ pdf ]
Colombe JB and Stephens G (2004) Statistical profiling and visualization for detection of malicious insider attacks on computer networks. Proceedings of the ACM Conference on Computer and Communications Security, Workshop on Visualization and Data Mining for Computer Security, Fairfax, VA, October 2004. [ pdf ]
Colombe JB, Sylvester J, Block J, and Ulinski PS (2004) Subpial and stellate cells: Two populations of interneurons in turtle visual cortex. Journal of Comparative Neurology 471:333-351. [ pdf ]
Colombe JB (2004) Toward view-invariant representations of object structure using object constancy cues in natural movies. Proceedings of the 33rd IEEE Applied Imagery Pattern Recognition (AIPR) workshop, Washington DC, October 2004. [ pdf ]
Colombe JB (2003) A survey of recent developments in theoretical neuroscience and machine vision. Proceedings of the 32nd IEEE Applied Imagery Pattern Recognition (AIPR) workshop, Washington DC, October 2003. [ pdf ]
Leonard JE, Colombe JB and Levy JL (2002) Finding relevant references to genes and proteins in Medline abstracts using a Bayesian approach. Bioinformatics 18:1515-22. [ pdf ]
Colombe JB and Ulinski PS (1999) Temporal dispersion windows in cortical neurons. Journal of Computational Neuroscience 7:71-87. [ pdf ]
Other writing
[ under construction ]
Resources
[ under construction ]