Imaging

Experts

Anya Waite

Alfred Wegener Institute for Polar and Marine Research
anya.waite@awi.de

Heidi M. Sosik

Woods Hole Oceanographic Institution
hsosik@whoi.edu

Lionel Guidi

Laboratoire Oceanographique Villefranche-sur-Mer
lguidi@obs-vlfr.fr

Rainer Kiko

GEOMAR
rkiko@geomar.de

Michael Kloster

Alfred Wegener Institute for Polar and Marine Research
michael.kloster@awi.de

Barbara Niehoff

Alfred Wegener Institute for Polar and Marine Research
barbara.niehoff@awi.de

Lisa Campbell

Texas A&M University
lisacampbell@tamu.edu

Mike Brosnahan

Woods Hole Oceanographic Institute

Articles (reviews and key papers)

Biard, T. et al. 2016. In situ imaging reveals the biomass of giant protists in the global ocean. Nature 532, doi:10.1038/nature17652

Guidi, L. E. A. 2016. Plankton networks driving carbon export in the oligotrophic ocean. Nature, 532, 465-471.

Hernández-León, S., and I. Montero. 2006. Zooplankton biomass estimated from digitized images in Antarctic waters: a calibration exercise. J. Geophys. Res. 111:C05S03 [doi:10.1029/2005JC002887].

Kiko, R., Biastoch, A., Brandt, P., Cravatte, S., Hauss, H., Hummels, R., Kriest, I., Marin, F., A. M. P. McDonnell, Oschlies, A., Picheral, M., Schwarzkopf, F. U., Thurnherr, A. M. & Stemmann, L. 2017. Biological and physical influences on marine snowfall at the equator. Nature Geoscience 10, 852-858

Lehette Pascal , Hernández-León Santiago , (2009), Zooplankton biomass estimation from digitized images: a comparison between subtropical and Antarctic organisms Limnol. Oceanogr. Methods, 7, doi:10.4319/lom.2009.7.304.

Picheral, M., Guidi, L., Stemmann, L., Karl, D. M., Iddaoud, G. & Gorsky, G. 2010. The Underwater Vision Profiler 5: An advanced instrument for high spatial resolution studies of particle size spectra and zooplankton. Limnology and Oceanography-Methods, 8, 462-473.

Robert K. Cowen, Adam T. Greer, Cedric M. Guigand, Jonathan A. Hare, David E. Richardson, Harvey Walsh Evaluation of the In Situ Ichthyoplankton Imaging System (ISIIS): comparison with the traditional (bongo net) sampler. Fishery Bulletin- National Oceanic and Atmospheric Administration, 01/2013; 111(1):1.

Sosik, H. M. & Olson, R. J. Automated taxonomic classification of phytoplankton sampled with imaging-in-flow cytometry. Limnol.Oceanogr. Methods 5, 204-216 (2007).

Waite, Anya M., Lars Stemmann, Lionel Guidi, Paulo H. R. Calil, Andrew Mc. Hogg, Ming Feng, Peter A. Thompson, M. Picheral, G. Gorsky. 2016. The wine glass effect shapes particle export to the deep ocean in mesoscale eddies. Geophysical Research Letters DOI:1002/2015GL066463