Servers and Databases

FlexPepDock

High resolution docking refinement of peptide-protein interactions

Piper-FlexPepDock

High resolution blind ab initio peptide docking (fragment based)

PeptiMap

Detection of peptide-binding sites on protein surfaces

Patch-Motif AligNments

PatchMan is a protocol for high-resolution global peptide-protein docking.

PeptiDerive

Identification of dominant linear peptide segments at protein interfaces   (incl. cyclization)

PeptiDock

efficient global docking of peptide recognition motifs using FFT

AutoPeptiDB

Curated database of peptide-protein complex structures (automated version of PeptiDB)

Homology Docking Benchmark  

Benchmark for the calibration of homology docking tools

FunHunt

classifier of correct protein-protein complex orientations