The Impact of Biosolids on the Abundance of Antibiotic-Resistance Genes in the Soil Microbiome
Jessie R.
Marin Academy Research Collaborative Program
Jessie R.
Marin Academy Research Collaborative Program
Soil is filled with living microorganisms like bacteria and fungi that break down and build up matter. Individual microbes carry out different functions, affecting the soil composition in different ways. A rich and diverse soil microbial community aids in plant health and productivity, contributing to increased crop growth (Lakshmanan et al, 2014).
Certain agricultural practices have been found to have negatively impacted the soil microbiome. Chemical fertilizers and other industrial agricultural practices have decreased microbial diversity in the soil, decreasing crop yield and spreading harmful chemicals into other parts of the soil and the environment. Fertilizers using organic and inorganic sources have been found to have alternate impacts on the microbiome; Li et al. found that organic nitrogen fertilizers increase nitrification and fixation in the soil while inorganic nitrogen fertilizers increase denitrification (2020).
This study aims to investigate the impact that a biosolid derived from blackwater by Milorganite has on the soil resistome. I hypothesize that the addition of a black-water derived biosolid will cause the level of nutrients such as nitrogen, phosphorus, and potassium, the amount of carbon and organic matter content, and the amount of carbon dioxide emissions to increase. The number of antibiotic resistance genes will increase as new antibiotics and antibiotic resistance genes are introduced from the biosolid.
At the moment, I am reaching out to my mentor and my contacts at Milorganite to solidify the parameters of my research project. I still need to decide exactly how many and which antibiotic resistance genes to study with PCR, but I am leaning towards triclosan resistance genes.
I have been working with Dr. Eoin Brodie, Senior Scientest in the Ecology department of the Earth and Environmental Sciences Area at Laurence Berkely National Labs.
I have been working with Aaron Tartakovsky, co-founder and CEO of Epic CleanTec, a company devoted to making wastewater treatment more sustainable by recycling wastewater into biosolids. Although I will not be using Epic CleanTec's biosolid, Aaron Tartakovsky has shaped my path of research by explaining the value of biosolids and providing other resources for me to build off of
I have been working with Jaime Staufenbeil, Operations Manager and Agronomist at Milorganite, to understand more about their unique process of creating biosolids. I have also reached out to a microbiologist at Milorganite, Kori Kenney, to learn more about the specific components of their product. I am excited to be using Milorganite in my research and making connections with the company.
I would like to continue my lab experiences past my senior year through the summer into my freshman year of college. I hope to maintain my connections to the scientific community and the MARC program.
Overall, I hope to influence those who refine biosolids and aid in the creation of better systems of agriculture. I hope to help find safe solutions to restoring the soil microbiome.