2025

53. Distinct clinical characteristics of acute cardiorenal syndrome (CRS) patients: An Indian cohort study for novel biomarker discovery. Dutta A, Verma S, Athira CA, Bahl A, Kumar V, Mittal A* , Basak T*. Physiological Reports. 2025 (Just Accepted)

52. Enzymatic craftmanship in collagen glycosylation. Ghosh S, Kumar D*, Mondal B*, Basak T*. Nat Commun. 2025 Aug 6;16(1):7252. doi: 10.1038/s41467-025-62768-w. PMID: 40770197

51. The Theatrics of Collagens in the Myocardium: The Supreme Architect of the Fibrotic Heart. Chakraborty S, Dutta A, Roy A, Joshi A, Basak T*. AJP-Cell Physiology.(2025)-https://doi.org/10.1152/ajpcell.01043.2024.

50. Decoding the Elegant Interplay among Different Stereo-Electronic Effects Due to the Ancient Prolyl 4-Hydroxylation Stabilizing the Collagenous Helicity . Joshi A, Basak T*, Mondal B*. iScience.(2025)- (https://doi.org/10.1016/j.isci.2025.112393).

49. Proteomics guided biomarker discovery, validation, and pathway perturbation in infection-related acute decompensation of cirrhosis. Garg P, Verma N, Valsan A, Sarohi V, Basak T, Gupta T, Kaur P, Ralmilay S, Singh S, De A, Premkumar M, Taneja S, Duseja A, Singh V, Bajaj JS. Clinical Gastroenterology and Hepatology (2025), doi: https://doi.org/10.1016/j.cgh.2025.01.005. 

48.  Tissue Fibrosis in Cardiorenal Syndrome: Crosstalk Between Heart and Kidneys. Dutta A, Chakraborty S, Roy A, Mittal A, Basak T*. Nephrology Dialysis Transplantation (ndt), 2025 https://doi.org/10.1093/ndt/gfaf009.

2024

47. Deciphering protein conversations: a proteomic exploration of protein–protein interactions. Yadav KA*,  Basak T*.  Journal of Proteins and Proteomics (Society Journal of PSI, India) 2024, https://doi.org/10.1007/s42485-024-00167-3. 

46.  ColPTMScape: An Open Access Knowledge Base for Tissue-Specific Collagen PTM Maps. Joshi A*, Nigam A*, Mudgal LN, Mondal B*, Basak T*.  Matrix Biology Plus 2024 Feb 29;22:100144. doi: 10.1016/j.mbplus.2024.100144. eCollection 2024 Jun.  

45.  Editorial: Volume II: fibrotic Tissue Remodeling as a Driver of Disease Pathogenesis. Mitra A*, Saraswati S*, Basak T*.  Front. Mol. Biosci 2024 Volume 11 doi: 10.3389/fmolb.2024.1356591. 

2023

44. Elucidation of Site-Specific Ubiquitination on Chaperones in Response to Mutant Huntingtin. Panda P, Sarohi V, Basak T*, Kasturi P*. Cell Mol Neurobiol. 2023 Dec 15;44(1):3. doi: 10.1007/s10571-023-01446-1.

43.  Urinary Apolipoprotein A1 and Neutrophil Gelatinase-associated Lipocalin in Children with Idiopathic Nephrotic Syndrome. Murugesan S, Saha A, Deepthi B, Kaur M, Basak T, Sengupta S, Batra V, Upadhyay AD. Saudi J Kidney Dis Transpl. 2023 Jan 1;34(1):13-20. doi: 10.4103/1319-2442.390998. Epub 2023 Dec 12.

42.  Editorial: Fibrotic Tissue Remodeling as a Driver of Disease Pathogenesis (Vo. I) Basak T*, Saraswati S*.  Front. Mol. Biosci 2023 Aug 29;10:1278388. doi: 10.3389/fmolb.2023.1278388. 

41.  A comprehensive insight and mechanistic understanding of the lipidomic alterations associated with Dilated Cardiomyopathy (DCM). Saha S, Singh P, Dutta A, Vaidya H, Negi PC, Sengupta S, Seth S, Basak T*.  JACC-Asia July 18, 2023, DOI: 10.1016/j.jacasi.2023.06.001.

40. Will “CLINICAL PROTEOMICS” lead to the discovery of new BIOMARKERS for Dilated Cardiomyopathy (DCM)? Saha S, Sarohi V, Basak T*.  Journal of Proteins and Proteomics (Society Journal of PSI, India). 2023, https://doi.org/10.1007/s42485-023-00110-y.

39.  A Narrative Review on Serum Biomarkers of Cardiac Fibrosis. Kumari S, Sharma U, Jindal D, Basak T.  Journal of Practice of Cardiovascular Sciences. 2023, doi: 10.4103/jpcs.jpcs_19_23

38. A Comprehensive Review on acute Cardio-Renal Syndrome: Need for novel biomarkers. Dutta A, Saha S, Bahl A, Mittal A*, Basak T*. Front. Pharmacol. 2023, May doi: 10.3389/fphar.2023.1152055

37. Perturbed post-translational modification (PTM) network atlas of collagen I during stent-induced neointima formation. Sarohi V,  Basak T*. J. Proteomics. 2023, Feb 10 doi: 10.1016/j.jprot.2023.104842.

2022

36. Exploring the cardiac ECM during fibrosis: A new era with next-gen Proteomics Sarohi V, Chakraborty S and Basak T*. Front. Mol. Biosci 2022 Nov 22;9:1030226. doi: 10.3389/fmolb.2022.1030226.

35.  Comprehensive mapping and dynamics of site-specific prolyl hydroxylation, lysyl-hydroxylation and lysyl O-glycosylation of collagens deposited in ECM during zebrafish heart regeneration.  Sarohi V, Srivastava S and Basak T*. Front. Mol. Biosci 2022 9:892763. doi: 10.3389/fmolb.2022.892763. 

34.  A Comprehensive Outlook on Dilated Cardiomyopathy (DCM): State-Of-The-Art Developments with Special Emphasis on OMICS-Based Approaches. Sarohi V, Srivastava S and Basak T*. J. Cardiovasc. Dev. Dis. 2022, 9(6), 174; https://doi.org/10.3390/jcdd9060174. 

2020

33. Purified Splenic Amastigotes of Leishmania donovani-Immunoproteomic Approach for Exploring Th1 Stimulatory Polyproteins. Misra P, Tandon R,  Basak T, Sengupta S, Dube A. Parasite Immunology, 2020 May 16;  e12729. doi: 10.1111/pim.12729.  

The Lab officially started in October 2019..!!

Previous Publications (PhD and Post-doctoral work)

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