Facilities

Computational and Bioinformatics analysis facility

Desktop Computers: Thirty (30)

• HP Desktops -16 GB RAM and 1TB GB HDD with the graphics card

Server/Workstation for NGS data analysis – 01

Server/Workstation for MD simulation – 01

Bioinformatics Software Facility:

Molecular Dynamics Simulations Software

·       GROMACS

·       Desmond (Academic Version)

·       Amber Tools

·       VMD

Structure visualization, Homology Modeling, and Docking Software

·       MODELLER

·       Autodock

·       Chimera 1.17.3

·       ChimeraX

·       Pymol

·       Discovery Studio

·       SAMSON ( Academic version)

·       MAESTRO

·       Swiss-PdbViewer

Molecular Evolutionary Analysis Softwares

·       Mega11

·       Phylip

·       Bioedit

Other softwares:

·       Jalview

·       Cytoscape

·       R and R studio

·       Avogadro

·       LigPlot

·       Chromas lite