Publications

Research Papers

1. Qu J, Prasad NK, Yu MA, Looney MR, Chen S, Lyden A, Crawford E, Silvis MR, Peters JM*, Rosenberg OS*. "Modulating pathogenesis with Mobile-CRISPRi." J Bacteriol. 2019 *co-corresponding authors. PMID: 31481541

2. Peters JM*, Koo BM, Patino R, Heussler GE, Hearne CC, Qu J, Inclan YF, Hawkins JS, Lu CHS, Silvis MR, Harden MM, Osadnik H, Peters JE, Engel JN, Dutton RJ, Grossman AD, Gross CA*, Rosenberg OS*. “Enabling Genetic Analysis of Diverse Bacteria with Mobile-CRISPRi.” Nat Microbiol. 2019 *co-corresponding authors. PMID: 30617347

3. Bhate MP, Lemmin T, Kuenze G, Mensa B, Ganguly S, Peters JM, Schmidt N, Pelton JG, Gross C, Meiler J, DeGrado WF. “Structure and function of the transmembrane domain of NsaS, an antibiotic sensing histidine kinase in S. aureus.” J Am Chem Soc. 2018 PMID:29771498

4. Sriram R, Sun J, Villanueva-Meyer J, Mutch C, De Los Santos J, Peters JM, Korenchan DE, Neumann K, Van Criekinge M, Kurhanewicz J, Rosenberg O, Wilson D, Ohliger MA. “Detection of Bacteria-Specific Metabolism Using Hyperpolarized [2-13C]Pyruvate.” ACS Infect Dis. 2018 PMID: 29405697

5. Koo BM, Kritikos G, Farelli JD, Todor H, Tong K, Kimsey H, Wapinski I, Galardini M, Cabal A, Peters JM, Hachmann AB, Rudner DZ, Allen KN, Typas A, Gross CA. “Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis.” Cell Syst. 2017 PMID: 28189581

6. Zhao H, Sun Y, Peters JM, Gross CA, Garner EC, Helmann JD. “Depletion of undecaprenyl pyrophosphate phosphatases (UPP-Pases) disrupts cell envelope biogenesis in Bacillus subtilis.” J Bacteriol. 2016 PMID: 27528508

7. Peters JM*, Colavin A*, Shi H*, Czarny TL, Larson MH, Wong S, Hawkins JS, Lu CH, Koo BM, Marta E, Shiver AL, Whitehead EH, Weissman JS, Brown ED, Qi LS, Huang KC, Gross CA. “A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria.” Cell. 2016 *co-first authors Subtiwiki paper of the month, June 2016 PMID: 27238023

8. Haft RJ, Keating DH, Schwaegler T, Schwalbach MS, Vinokur J, Tremaine M, Peters JM, Kotlajich MV, Pohlmann EL, Ong IM, Grass JA, Kiley PJ, Landick R. “Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria.” Proc Natl Acad Sci U S A. 2014 PMID: 24927582

9. Larson MH, Mooney RA, Peters JM, Windgassen T, Nayak D, Gross CA, Block SM, Greenleaf WJ, Landick R, Weissman JS. “A pause sequence enriched at translation start sites drives transcription dynamics in vivo.” Science. 2014 perspective in Science PMID: 24789973

10. Peters JM, Mooney RA, Grass JA, Jessen ED, Tran F, Landick R. “Rho and NusG suppress pervasive antisense transcription in Escherichia coli.” Genes Dev. 2012; research highlight in Nat Rev Microbiol PMID: 23207917

11. Peters JM, Mooney RA, Kuan PF, Rowland JL, Keles S, Landick R. “Rho directs widespread termination of intragenic and stable RNA transcription.” Proc Natl Acad Sci U S A. 2009 PMID: 19706412

12. Mooney RA, Davis SE, Peters JM, Rowland JL, Ansari AZ, Landick R. “Regulator trafficking on bacterial transcription units in vivo.” Mol Cell. 2009 PMID: 19150431

Reviews

1. Peters JM, Silvis MR, Zhao D, Hawkins JS, Gross CA, Qi LS. “Bacterial CRISPR: accomplishments and prospects.” Curr Opin Microbiol. 2015 PMID: 26363124

2. Gray AN, Koo BM, Shiver AL, Peters JM, Osadnik H, Gross CA. “High-throughput bacterial functional genomics in the sequencing era.” Curr Opin Microbiol. 2015 PMID: 26336012

3. Hawkins JS, Wong S, Peters JM, Almeida R, Qi LS. “Targeted Transcriptional Repression in Bacteria Using CRISPR Interference (CRISPRi).” Methods Mol Biol. 2015 PMID: 25981485

4. Peters JM, Vangeloff AD, Landick R. “Bacterial transcription terminators: the RNA 3'-end chronicles.” J Mol Biol. 2011 PMID: 21439297